| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1104 |
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| Symbol | |
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| ID | 4037902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1201230 |
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| End bp | 1203416 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637976486 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_583259 |
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| Protein GI | 94310049 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0413225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.151659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGC TTGATTCATC CAACAGGCAC GCCAGCTTGC GTGCGCGCAA TTCGACGCGC
TCGGCACGCC CGCTGCCGAT CCTGTCGCCG GTAGCCATTG CCGTGCTGGG CTTCAGCCTT
TCGCAGCCAG CGCAGGCACA GTCGCAGGAC ACAGCCGACG CGACCATGCT GCCGGCTGCT
ACCGTGGTGG CGGACCGCTC GGGGGAGGCC GTCAAGGTGG AACGGGTCAA TGGCGGCGCG
CTGGGCGACC GCAAGCCCGT GGATACCCCC TTCTCCGTGG TGGCCGTATC GGGCGACGAG
ATCCAGCAAC GCCTGGCGCA GACGGCCAAC GACGTGTTCA AGTACGACCC GGCCGTGTCG
GTGCTGGGCG ATAACGCGCG GACCGAGAAC TCCTACTTCG CTGTGCGCGG CATGCGCGTG
GACATGCTCA ATGGCACCAA GGTGGATGGG CAGAACTTCG TCACGTGGGA TGCCGACATT
CCGCTCGAGC CATTCGAACA GGTGGAACTG CTCAAGGGGC TGTCAGGCTT CATGTACGGC
TTCGGCTCGC CCGGCGGCAT CATCAACTAT GTGGTGAAAC GTCCGACGGA CAAGCCGTTG
CGGGAAGTCA CGGTCGGCTA CCAGGCCAAC AGCGTCTGGA GCGAGAAAGT CGACCTCGGC
GGCCGCTTCG GCGTGGATGA TCGCTTCGGC TATCGGATCA ATGCGGTCAA CGAGGATGGC
AACACCAACG AGCCGAACGT GCATGTGCGG CGCCAGGCCT TCTCGCTGGC CACGGATTTC
CGCATCACCC CGGACCTCAC ATGGAATGCC GACGTCATGT ACTGGAAGCG CAAGTCGCAG
GGCACGATCT TCGGCCTGTC GTTCGCGTCG GACCTGTCCA TCCCGCCCGC CAGCAGCGTG
GCCCGGAATC TGGCACAGCC GTGGTCGTCG CACGAGACCG ACACGCTTAC CGTAGGCACC
GGCGTGGACT ACCGTATCAA CGATGCCTGG CAGGCCAGCT TCAAGTATCG ATTCGCACGC
CAGAACCGGC TTAACGCCGA CAGCTTCCTG TACGTCACCA ATAGTGCCGG GGATTTCTCC
GACACCAACT ACCGCTGGAA AACCGCCTAC TACTACCAGG CGTACGACGC AATGGTGCAG
GGCAAGTTCG AGACGGGTGC GATCAAGCAC GATATCGTTG CCGGCATCGG CTACCTGTCG
CAGGTGCGCG AACTCGACAA CGGTCTTGGC GGCAATGGCA TACCCATGGG CACCAGCAAT
CTGTATAACC CGGTGCCGCT GCCCGAGCAG CCGGACGTGG GCAAGGACTA CATCCCGTAC
CGCGACTACA GGATTCAGCA GAAGTCGGTC TACCTGAGCG ACACGATCCA GTTCACGCCA
CGTTTTTCGG TACTGGCCGG CGTTCGCTAC AACGACTTCA CGCAGGACAA CTACGATCCG
TCGCAAGTCA AAACCTCGCA CTACAGCGCC AATCCGTTCA CCCCAACCGT TGCGCTGATG
TACAAGACCG ACGACTTCTC CACGGCCTAT TTCAGCTACG TGGAGTCGCT GGAGCAAGGA
GGCTCGGCGG GCGTCACCAA TGTCAACGCC GGGCAGACCT TTGGTCCGCT CAAGAGCCGG
CAATACGAAC TGGGATTCAA GACCGACCGC GACAAGTGGG GCGCCAATGT CGCGCTGTTC
CGCGTCGAAA AGGGCTACGA GTACACCAAC TCGGCCAACT ACTTCGTGCA GGACGGCAGC
CAGCGTTTCA CCGGTCTGGA CACAAGCGGC TGGTTGCGCG TAGCACGCGA TGTACGGCTG
ATGGGCGGTG TGCTTTGGCT CGACACGAAG ACCTCTGGCG TCGACGATCC CCAGGTCAAT
GGCAAGCGCG TGTTTGCCAC GCCGAGCTAC ATCGTGACGG GCCGCATCGA GTACGACACC
CCGTTCGCCC CCGGCCTGAC GCTGTGGACC GGCGCCAAGG TAACCGGCGA TATGTATGTC
AACTCGGCCA ACACACAGCA CATACCGTCA TACACCACCG CCGATGTCGG CGCGCGCTAC
ACCACGCGCA TGGCTGGCAA GACGCTGACA GTGCGCGCTG TGGTCAACAA TGTGTTTGGA
CGGCGGTACT GGACGACCAC GTACGATGGC TTTGTCCTGC CAGCGTCAAC ACGCACGTTC
CTGGCGAACG CGTCGCTGCA GTTCTGA
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| Protein sequence | MSMLDSSNRH ASLRARNSTR SARPLPILSP VAIAVLGFSL SQPAQAQSQD TADATMLPAA
TVVADRSGEA VKVERVNGGA LGDRKPVDTP FSVVAVSGDE IQQRLAQTAN DVFKYDPAVS
VLGDNARTEN SYFAVRGMRV DMLNGTKVDG QNFVTWDADI PLEPFEQVEL LKGLSGFMYG
FGSPGGIINY VVKRPTDKPL REVTVGYQAN SVWSEKVDLG GRFGVDDRFG YRINAVNEDG
NTNEPNVHVR RQAFSLATDF RITPDLTWNA DVMYWKRKSQ GTIFGLSFAS DLSIPPASSV
ARNLAQPWSS HETDTLTVGT GVDYRINDAW QASFKYRFAR QNRLNADSFL YVTNSAGDFS
DTNYRWKTAY YYQAYDAMVQ GKFETGAIKH DIVAGIGYLS QVRELDNGLG GNGIPMGTSN
LYNPVPLPEQ PDVGKDYIPY RDYRIQQKSV YLSDTIQFTP RFSVLAGVRY NDFTQDNYDP
SQVKTSHYSA NPFTPTVALM YKTDDFSTAY FSYVESLEQG GSAGVTNVNA GQTFGPLKSR
QYELGFKTDR DKWGANVALF RVEKGYEYTN SANYFVQDGS QRFTGLDTSG WLRVARDVRL
MGGVLWLDTK TSGVDDPQVN GKRVFATPSY IVTGRIEYDT PFAPGLTLWT GAKVTGDMYV
NSANTQHIPS YTTADVGARY TTRMAGKTLT VRAVVNNVFG RRYWTTTYDG FVLPASTRTF
LANASLQF
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