| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1090 |
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| Symbol | |
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| ID | 4037888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1183533 |
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| End bp | 1185125 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637976472 |
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| Product | EAL-containing signal transduction protein |
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| Protein accession | YP_583245 |
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| Protein GI | 94310035 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0487419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00477361 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAAGC GCATCACAGT TGTTTCGGCT TCGGTTGCCC TTGGGTGTCT CGCGACGGTC
GTCCCAGTCC TCACCAGCCT CTATGTCGCG AAAAAAGACG TCGAGCGACG AGAGCGTGCC
GAGATTAAGG ACTTCGCCAA TAAGGCGATC ATGCGCGCGG AAGTTGTCAC GTCCCAGGCC
TTTGCCGCGC TCAATGATCT TGACCAACAG CCGGGTGCGC CTTGCTCGCC CCCCAACCTC
GAACATGCGG CACGCGTGAT CTACAACTAC CGGTACGTCC AGGATGCCGG TGCATACGCC
GATGGGCTAT ACCTCTGCTC GCCACTGCTC GGCGACGTGC GCGCGAAGGA TCTAACGTTG
CCTCCCCCGG ATTATCAGAA CAATGAGGGG TACTCCATGT GGTTCAGGCG GAAGAGTCCG
CTTAGCAACG AGCGCAATGA CCTCCAGATC GGACGCAACG GCCGTTACGT CTCCATCGAT
CGCGGTTCTT ACGTCGACCT GATCGACCCG GCCAAGCGTC CCATCGCGGC AATCCAAATC
CCCACAGGAA CGCTGATCGC CGTCTCAACC GGCGCCGACC CAGGCGACAT GCTCAACGCC
TGGAAGCAAA GTGGCAACGT GAAGAGTGAC GAATGGAATT ACGCCGTAGC CCAGTCTTCA
ACACGACAGA TCGCCGTCGT TGTGAAATCC CCGCGCAGCA GTATCGCCGG CAACTGGCCG
AAGTTGCTGG CTGCCTGGCT TTCCATTGGC GTCACTGCGG GTGCATTGCT TGGATGGCTT
GCGTACAAAC GCATCTCCTG GCAGTTCTCA TTCCCGGCAA CCCTTGAATG GGCCATTTCA
CGGCGCAAGA TCGACGTTGT CTATCAGCCG ATCATCCGCA TCGCCGACAA CGAATGCGTA
GGCGTCGAGG CGCTCACGAG GTGGACCCTT CACGGTCAAT CGATCTCACC CGAGGTATTT
GTGCGAGTCG CCGAGGAAAA TAACCTCATC CAGTCTTTGA CAGACGTCGT CCTCGAGAAG
ACCATCGCGC AGCTTGGCAA GATGCTCGTC GCGAATCCCA CGTTCTATGT CTCGATCAAT
GTGAGCAGCG AGGATCTGCG CAGCGTACGC TTCCTTAACC AACTCACGTC GTCGCTCGCT
GGGACGGGCA TCGCCCCCCG GCAGATCCGA ATCGAAGCGA CGGAGCGCAG TTTCATGAAT
ACGGAAGAGA CACGAGGTGT CATTGCCGCG TTCAGGGCAG CCGGCCACCC CATCTACATT
GACGACTTTG GAACAGGCTA CTCGAGTCTG TCTTATCTGC AATCCTTCGA GATTGACGTT
CTGAAAATCG ACAAGTCGTT CGTCGACACG ATCGAGCAGG ACACTGCCTC AAGTGTTGTC
GCTCCCCACA TTATCGCGAT GGCTCATGAC ATGGGCTTGG AAATCGTCGC TGAAGGTGTG
GAGTCGGCGG TTCAGATCGC ATGGCTCCTC GAAAGAGGAG TGCATTATGC GCAGGGCTGG
TATTACGCCA AGGCGATGAC GGCGAGCACA CTCGCACCAT GGCTTAGCAG AGTTCATGCG
CCACGCCAGG CAGTCAGCTT GGCGACAAGC TAG
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| Protein sequence | MIKRITVVSA SVALGCLATV VPVLTSLYVA KKDVERRERA EIKDFANKAI MRAEVVTSQA
FAALNDLDQQ PGAPCSPPNL EHAARVIYNY RYVQDAGAYA DGLYLCSPLL GDVRAKDLTL
PPPDYQNNEG YSMWFRRKSP LSNERNDLQI GRNGRYVSID RGSYVDLIDP AKRPIAAIQI
PTGTLIAVST GADPGDMLNA WKQSGNVKSD EWNYAVAQSS TRQIAVVVKS PRSSIAGNWP
KLLAAWLSIG VTAGALLGWL AYKRISWQFS FPATLEWAIS RRKIDVVYQP IIRIADNECV
GVEALTRWTL HGQSISPEVF VRVAEENNLI QSLTDVVLEK TIAQLGKMLV ANPTFYVSIN
VSSEDLRSVR FLNQLTSSLA GTGIAPRQIR IEATERSFMN TEETRGVIAA FRAAGHPIYI
DDFGTGYSSL SYLQSFEIDV LKIDKSFVDT IEQDTASSVV APHIIAMAHD MGLEIVAEGV
ESAVQIAWLL ERGVHYAQGW YYAKAMTAST LAPWLSRVHA PRQAVSLATS
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