Gene Rmet_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1085 
SymbolcysS 
ID4037882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1176601 
End bp1178076 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content62% 
IMG OID637976466 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_583240 
Protein GI94310030 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.189428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0293604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTCG CGCGCCATCG ACATGCTTGT CAGCGCGCGG CAGTCTCGCT CGATGTCATC 
GACGCCGTAT CCACTCACAT CCGCTTCATG CAGCAATTGA ACATCTACAA CACGCTCGCG
CGTGAAAAGC AGCCATTCGT GCCCATCGAA CCCGGCAAGG TCCGCATGTA TGTGTGCGGC
ATGACCGTGT ACGACTACTG TCACGTTGGC CATGCGCGGG TGATGGTGGT GTTCGATATG
GTGCACCGCT GGCTGCGCGC CGCCGGGTAC GACGTGACGT ACGTCCAGAA CATCACTGAT
ATCGATGACA AGATCATTCG TCGCGCCGCG GAGAACGGCG AGACGATCGG TCAGCTCACC
ACGCGTTTCA TCCAGTACAT GCACGAGGAT GCCACGGCGC TGGGCGTGAT CCGTCCCGAC
TATGAGCCGC GCGCGACCGA ATACGTGCCG CAGATGCTCA ATATCATCGA GAAACTCGAA
GCCAAGGGCC TGGCCTACCA GGCGACGGAC GGCGACGTGA ACTACTCGGT GCGCAAGTTC
CCGGGCTACG GCAAGCTGTC GGGCAAGTCG CTGGAAGATC TGCGCGCCGG CGAGCGCGTC
AATGCCAACG ATGCCAAGCA GGATCCGCTC GACTTCGTAC TGTGGAAGTC GGCCAAGGCA
ACCGAGCCGC CCGAAAGCAA GTGGGACTCG AAGTGGGGCA GCGGCCGTCC GGGCTGGCAT
ATCGAATGCT CGGCCATGAG CTGCACGCTG CTCGGTGAGC ATTTCGATAT TCACGGCGGC
GGCGCGGACC TGCAGTTCCC GCACCACGAG AACGAGATCG CGCAATCGGA AGGGGCTTCC
GGCAGGCCGT TCGTCAATAT GTGGATGCAC AACGGTTTCG TGCGTGTGAA TGACGAGAAG
ATGTCGAAAT CGCTCGGCAA CTTCTTCACG ATCCGCGACG TGCTGAAGGA GTACGACGCC
GAAGTGGTGC GCTTCTTCAT CCTGCGCGCG CACTATCGGA GCCCGCTGAA CTATAGCGAT
GCCCACCTTG ATGACGCACG CCACGCACTG ACGCGCCTGT ATACAGCGCT CAAGGAAACG
CAGCCCGGCG GTTGCGCGGT GGATTGGGAA GAGTCTCACG CGAAGCGCTT TGCCGAAGCG
ATGAACGACG ACTTCAACAC GCCAATCGCC ATGTCGGTGC TGTTCGACCT GGCCAGCGAG
GTCAATCGCA CCGGTTCCGT GGCCGCGGCG CATCAACTCA AGGCGCTCGG CGGCACGCTG
GGTCTGCTTG AGCGCGATCC GCACACGTTC CTGCAAGGTG GTCATGTCGC CGGCAGCCTG
AGCGGCGAGC AGATCGAAGC GCAGATCGCG GCCCGCCGTG CGGCCAAGGC CGCGCGCAAT
TTCGCCGAGG CCGACCGCAT TCGCGCCGAA TTGCTCGAAG CCGGCGTGGT GCTGGAAGAC
AAGCCAGGTG GTGCCACCGA GTGGAGGCGT GCTTGA
 
Protein sequence
MGLARHRHAC QRAAVSLDVI DAVSTHIRFM QQLNIYNTLA REKQPFVPIE PGKVRMYVCG 
MTVYDYCHVG HARVMVVFDM VHRWLRAAGY DVTYVQNITD IDDKIIRRAA ENGETIGQLT
TRFIQYMHED ATALGVIRPD YEPRATEYVP QMLNIIEKLE AKGLAYQATD GDVNYSVRKF
PGYGKLSGKS LEDLRAGERV NANDAKQDPL DFVLWKSAKA TEPPESKWDS KWGSGRPGWH
IECSAMSCTL LGEHFDIHGG GADLQFPHHE NEIAQSEGAS GRPFVNMWMH NGFVRVNDEK
MSKSLGNFFT IRDVLKEYDA EVVRFFILRA HYRSPLNYSD AHLDDARHAL TRLYTALKET
QPGGCAVDWE ESHAKRFAEA MNDDFNTPIA MSVLFDLASE VNRTGSVAAA HQLKALGGTL
GLLERDPHTF LQGGHVAGSL SGEQIEAQIA ARRAAKAARN FAEADRIRAE LLEAGVVLED
KPGGATEWRR A