Gene Rmet_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1080 
Symbol 
ID4037877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1172854 
End bp1173597 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content65% 
IMG OID637976461 
Productserine O-acetyltransferase 
Protein accessionYP_583235 
Protein GI94310025 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0884216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.172973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACTC GCCTGAAGGA AGATATCGAT ACGATCATGC TGCGCGACCC CGCCGCGCGC 
AGCCGTCTGG AAGTCCTGAC TTGCTATCCC GGGCTGCACG CCGTGGTGTT TCACCGCGTG
GCCAATGCGT GCTGGCGAGG TGGATTTCAC TGGCTGGGGC GCTGGATCTC GCACTGGTCC
CGCTTTCTGA CCGGGATCGA GATCCACCCG GCGGTCAAGC TGGGTCGTCG CGTGTTCATC
GACCATGGCA TGGGCGTGGT GATCGGCGAA ACCGCCGAGA TTGGCGACGA TTGCACGATT
TACCAGGGTG TGACGTTGGG CGGCACGTCG CTGTACAAGG GCCAGAAACG CCATCCGACG
CTGGGTGTCG GCGTGGTGGT GAGCGCCGGC GCCAAGGTGC TCGGCGGCTT CGAGGTGGGC
GCGGGCGCGC GCGTTGGATC TAATGCCGTC GTGCTGAAGC CTGTGCCCGC TGGGGCGACG
GCAGTGGGGA TTCCGGCACG CATCATCATG CCCGATGCGC CTTCCACGCA GCAGGGCGCG
AAACAGGAAT TCTCGGCCTA CGGCATCACG CCGAACGCGG ACGATCCCGT GTCCCTGGCG
CTCAAGAGCC TGATCGACAA CGCGGCCAAG CAACATGACC GCATCGAGGC CGTGCTGGCC
GCGCTCGACC GGCTCGGCGA GCATCTCGAG AACACGCCGA ACGACCGCTT CGACGCGAGC
GAGCTGCGCA AGCTGATGAA GTAG
 
Protein sequence
MFTRLKEDID TIMLRDPAAR SRLEVLTCYP GLHAVVFHRV ANACWRGGFH WLGRWISHWS 
RFLTGIEIHP AVKLGRRVFI DHGMGVVIGE TAEIGDDCTI YQGVTLGGTS LYKGQKRHPT
LGVGVVVSAG AKVLGGFEVG AGARVGSNAV VLKPVPAGAT AVGIPARIIM PDAPSTQQGA
KQEFSAYGIT PNADDPVSLA LKSLIDNAAK QHDRIEAVLA ALDRLGEHLE NTPNDRFDAS
ELRKLMK