| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1079 |
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| Symbol | |
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| ID | 4037876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1171656 |
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| End bp | 1172525 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637976460 |
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| Product | RNA methyltransferase TrmH |
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| Protein accession | YP_583234 |
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| Protein GI | 94310024 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.130635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.179328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG TGTTGAACTC TCAGATGGAT CCGATCCCGC GCGGCGCGGC CGCAAGTGAT
CTTTCGGACA TTTTTGCGCA TGTGCGTGTG GTGCTGGTGG AAACCAGCCA CCCCGGCAAC
GTGGGCTCGG TCGCGCGGGC GATCAAGACG ATGGGCTTCG GGCACGTGCC GGGGAGCCTG
GTGCTGGTCT CGCCGCGCGA GCCGGGCGTC GTGTCGCATC CCGATGCCGT CGCGATGGCC
AGTGGTGCCG ACGATGTGCT GGCCAGCGCC ACGATCGTCG ACAGCATCGA GGCCGCGCTG
GCTGGCACGG CCTTTACCGT CGCCATGACC GCCCGGCAGC GCGAATTCGG GCCGCCGAGG
CTGCTACCGC GCGCCGCCGT GGCCAAGGCG CGGTCGGTGC TGGAGGCGGA CCCCGCTACC
ACGGTCGCCT TCGTATTCGG CAATGAACGC TTCGGCTTGC CGAACGACGC GGTATTGCGC
TGTTCGGCGG TGACGCATAT TCCTGCCAAT CCGGTTTACG CCTCTCTCAA CCTGGCCCAG
GCCGTGCAGC TCATTGCCTA TGAGATGCGG CTGGCCCTGC TCGAGGCGCA GGAAACGGCC
GGCGGGCTCC CGGACGTCGC TGGCGATATC GGCTATGCTG GTGACCCCGC CACCACCGAG
CAGATCGAGG CGATGTTTGG CCACCTTCAG GCCGGGCTTG CGGCGATCGG CTTTCTGGAC
CCGGCGAATC CGCGCAAGCT GATGCCGCGC CTGCGCCGGT TGTTCGCGCG GACGGGCCTG
GAGCGCGAGG AAGTGAACAT CCTGCGTGGC ATCGCCAAGC GCATGCTGCT GACGGGCGAT
GCAAAGCACG ACGACAACAA GGAAGACTAG
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| Protein sequence | MTEVLNSQMD PIPRGAAASD LSDIFAHVRV VLVETSHPGN VGSVARAIKT MGFGHVPGSL
VLVSPREPGV VSHPDAVAMA SGADDVLASA TIVDSIEAAL AGTAFTVAMT ARQREFGPPR
LLPRAAVAKA RSVLEADPAT TVAFVFGNER FGLPNDAVLR CSAVTHIPAN PVYASLNLAQ
AVQLIAYEMR LALLEAQETA GGLPDVAGDI GYAGDPATTE QIEAMFGHLQ AGLAAIGFLD
PANPRKLMPR LRRLFARTGL EREEVNILRG IAKRMLLTGD AKHDDNKED
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