Gene Rmet_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1066 
Symbol 
ID4037863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand+ 
Start bp1158967 
End bp1159632 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID637976447 
Productpeptidase M50 
Protein accessionYP_583221 
Protein GI94310011 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.128232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.764642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCCT CCCTGATTCA GACCTTCGCG GTCTACGCCC TGCCTGTTCT GTTCGCCATC 
ACGCTGCACG AGGCCGCGCA TGGCTATGTG GCCAAGCATT TTGGCGACAA CACCGCCTAC 
CTGCTTGGCC GGGTAAGCCT GAACCCGGTA CGGCACATTG ATCCGATCGG CACGGTGGCG 
GTGCCCCTGC TCCTGTACTT CCTGACTGCC GGCCAGTTCG TCTTCGGCTT CGCCAAGCCT 
GTGCCGGTGG CGTTCGATCG CCTGCGCAAT CCGCGCTGGC ATGGCATGTG GGTGGCGCTG 
GCCGGCCCGG CCAGCAATAT CGTCCAGGCG TTCGCGTGGG CGCTGGTGGC CATTGGTCTG 
GCGCTGGCAC ATATCCAGGA GCCGTTCTGG AGCGAAATGG CCCGTGCTGG CGTACTGGTC 
AATACGGTGG TGGCGGCGTT CAACCTGTTC CCGATTCCAC CGCTCGATGG TGGCCGGGTA 
CTGACGGCGC TGCTGCCGCA GCGGCTTGCC GGCGTCATGG CGCGCATCGA GCCCTATGGC 
ATTTTTGTCG TTCTCGCGCT GGTGGCGGCG GGTGTGATCA CCAAGATCTG GATGCGTCCG 
GTCATGAACG GGCTGCTATC GATCGTCGAG TTGATGCTGC GTCCGGTCAT GTGGCTGCTC 
CAGTGA
 
Protein sequence
MDSSLIQTFA VYALPVLFAI TLHEAAHGYV AKHFGDNTAY LLGRVSLNPV RHIDPIGTVA 
VPLLLYFLTA GQFVFGFAKP VPVAFDRLRN PRWHGMWVAL AGPASNIVQA FAWALVAIGL 
ALAHIQEPFW SEMARAGVLV NTVVAAFNLF PIPPLDGGRV LTALLPQRLA GVMARIEPYG 
IFVVLALVAA GVITKIWMRP VMNGLLSIVE LMLRPVMWLL Q