Gene Rmet_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1063 
Symbol 
ID4037860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1156221 
End bp1157282 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content66% 
IMG OID637976444 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_583218 
Protein GI94310008 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.101506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGA CACCCACCTC CGCGCCAGAA ACCACCCAGA CCGATGTGCT GATCGTCGGC 
GCAGGCCCGG TGGGGCTGTT CGCGGCGTTT CAGGCCGGTG TGCTGGGACT GAAATGCGAG
ATCGTGGATG TGCTCGACCG CGCCGGCGGC CAGTGCACGG AGCTGTACCC CGAGAAGCCA
ATCTACGATA TTCCGGCCGT CCCGGGCTGC CTCGCCCAGG ACTTGGTCGA CCGCCTGCTG
GAGCAATGCG CGCCTTTTGC GTTTCCGATG CACTTCAGCC AGCGTGCCGA ATCGGTCAGC
GACACCACCT GCACAAACGG CCATCCGCGC CTGCTGGTGA CCACCGACGC AGGCAAGCGC
TTCGACGTGG CCGCGGTGCT GATCTGCGCT GGTGCCGGCG CCTTCGCACC GCAACGTGTG
TCGCTGCCAG AAGCGGCAGC GCTGGAAGAC CGTCACCTCC ACTACGCCGT GCGCGATCTA
TCGCGCTTCG CCGGCAAGCG TGTGATCGTG GCCGGCGGCG GCGATTCGGC TCTGGATTGG
GCGATGGCAT TGCGCAAGAC TGCGGCGCGC GTGACGCTAC TGCACCGGCG CGAAGGATTC
CGCGCGGCCG ACCACACGGT CAAGGCGATG CGTGACGCGG TAGCCGCTGG CGAGATGGAT
TTCGTGGTCG GCATGCTTGG CGGGCTCCAG ACCAATGGGG ATGGCGCGCT GACCGGCGCG
GTGGTCAAGT CGCGCGACGG CGAGCAGACG ATTCCCGCCG ACGACCTTGT CGCCCTGTAT
GGTCTGGTGT CCGAGCCGGG CCCGATCGCA CAGTGGGACA TGGATATGCG CGCGGGCCGT
ATCGCGGTCG ATACCACGAC GTATGAAAGC TCCCGCCGGG GCATCTTCGC GGCCGGCGAC
ATCGCGTTCT ATCCGAACAA GCAGAAACTG ATCCTGTCGG GCTTCCACGA GGCCGCGCTG
GCGCTGCGCA AGGCCTATCA CTACGCATTC CCCGAGAAGT CGCTGGTGCA CGTGCATACG
AGCAACAACG CGGCGCTCAA GGAAAGGCTC ACGCACGGGT GA
 
Protein sequence
MSTTPTSAPE TTQTDVLIVG AGPVGLFAAF QAGVLGLKCE IVDVLDRAGG QCTELYPEKP 
IYDIPAVPGC LAQDLVDRLL EQCAPFAFPM HFSQRAESVS DTTCTNGHPR LLVTTDAGKR
FDVAAVLICA GAGAFAPQRV SLPEAAALED RHLHYAVRDL SRFAGKRVIV AGGGDSALDW
AMALRKTAAR VTLLHRREGF RAADHTVKAM RDAVAAGEMD FVVGMLGGLQ TNGDGALTGA
VVKSRDGEQT IPADDLVALY GLVSEPGPIA QWDMDMRAGR IAVDTTTYES SRRGIFAAGD
IAFYPNKQKL ILSGFHEAAL ALRKAYHYAF PEKSLVHVHT SNNAALKERL THG