| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1062 |
|---|
| Symbol | |
|---|
| ID | 4037859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1155271 |
|---|
| End bp | 1156164 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637976443 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_583217 |
|---|
| Protein GI | 94310007 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00192187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCA CGGAAACCTC GCGTTCCGAA TTTATCACGC TGCGGGGGCT CCGCACGCAC
GTGCGCCAAT GGGGAGAGCC TGGCGCGCCC AAGCTGTTCA TGCTGCATGG CTGGATGGAC
GTGGCCGCTT CGTTCCAGTT CCTGGTAGAT GCGTTCCAGC GCGACTGGCA CGTGATCGCC
ATGGACTGGC GCGGCTTCGG CGAGACGGAT CATCCCTCGC GCTATCCGGG TACCGCGTCG
TACTGGTTTC CTGATTACGT CGCCGATCTC GAGGGACTGA TCGACCACTA CCAGCCCGAC
GGACAGGTGG ATCTGGTGGG ACACAGCATG GGTGCCAATG TAGTGTGCAT CTACGCTGGC
GTGCGTCCGG AGCGTGTGCG GCGCGTCGTG GACCTGGAGG GGTTCGGGAT GACGCGCACA
CGCCCCGAGC AGGCGCCGGG CCGCATGGCG CGTTGGCTCG ACGAGCTACG CAATCCGCCC
GAGTTGAAGA CCTACGAGAG CGAGGCAGCG GTCGCGGCGC GTCTGCAGAA GACCAATCCG
CGCTTGCCCG ATGACCGGGC CGCATTCCTC GCCGCGCACT GGTCGCGTCG CAATGCCGAT
GGCAGGTGGG AAATTCTTGG CGATGCCGCT CACAAGATGA CCAACCCGAT GCTGTATCGC
ATCGACGAAA TCATGGCGAT CTGGGCCAAG GTCACGGCGC CGGTGCTGCA CGTGGAGGCA
CGCGATTCCG CCACGCTCAA GCACATCGCG CACAAGCAGA CCATCGAGGA GTTCAGGGAA
CGCTTCCGGG TGTTCTCCGA CTTCCGCGAA GCCATCGTCG ACGATGCGGG GCACATGCTG
CATCACGACC AGCCGGCGGT GGTGGCCAGA CTGATCGAGG ATTTTCTGAT CTGA
|
|---|
| Protein sequence | MTITETSRSE FITLRGLRTH VRQWGEPGAP KLFMLHGWMD VAASFQFLVD AFQRDWHVIA
MDWRGFGETD HPSRYPGTAS YWFPDYVADL EGLIDHYQPD GQVDLVGHSM GANVVCIYAG
VRPERVRRVV DLEGFGMTRT RPEQAPGRMA RWLDELRNPP ELKTYESEAA VAARLQKTNP
RLPDDRAAFL AAHWSRRNAD GRWEILGDAA HKMTNPMLYR IDEIMAIWAK VTAPVLHVEA
RDSATLKHIA HKQTIEEFRE RFRVFSDFRE AIVDDAGHML HHDQPAVVAR LIEDFLI
|
|---|
| |