| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1061 |
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| Symbol | |
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| ID | 4037858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1153398 |
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| End bp | 1155185 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976442 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_583216 |
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| Protein GI | 94310006 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.652344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGGATT ATAGCCATTT CGCGAGATCC GGGCGCGACC GACAACCTGG AGACAACCGG
ATGACCGCCT TGCCGGCCAC GCGGCGCGAC GACTATCGCG CACTGCACGA TTCCTTTCAC
TGGGACGTGC CCGAGATATT CAACCTGGCC GAAGTCTGCT GCGGCCGCTG GGCACGCGAT
CCGGCCACGA TGCACCGCAT CGCGGTCTAC ACGGAGCACG AGGACGGCCG ACGCGCCTCG
CATACCTATG CGCATATCCA GGCCGAGGCG AACCGTCTTT CGCGCGCCCT GCGCGAACTC
GGCGTGCAGC GTGGCGACCG CGTGGCCATC GTCATGCCCC AGCGCATCGA GACCGTGATC
GCCGGCATGG CCGTCTACCA GCTCGGCGCG GTAGCCATGC CGCTGTCGAT GCTGTTCGGC
CCAGAGGCCC TGTCCTATCG GATCGACCAC AGCGAGACCC GCGTGGCCAT CGCCGACGAG
ACCTCGATCG ACAACATGCT CGCCGCCCGC CCCGACTGCC CGACGCTGCG GACAGTCATC
GGCGTGGGTG ACGCAACCGG GCGCGGCGAT CTGGACTGGG ACACGCTGCT GGCCGCGCAG
ATCCCCGAGT TCACCGCCGA GCAGACCAAG GCCGAGGAAG CCGCGGTGCT GATCTACACC
AGCGGCACCA CCGGCCCCCC GAAAGGCGCG GTCATCCCGC ATCGCGCACT GATCGGCAAT
TTGACCGGCT TCGTGTGTTC GCAGAACTGG TATCCGCAGG ACGACGACGT GTTCTGGAGC
CCGGCGGACT GGGCCTGGAC AGGTGGCTTG TGGGATGCGC TGATGCCGGC GCTCTACTTC
GGCCGTCCGA TCGTCGGATA TCAGGGGCGA TTTTCTGCGG AGCGCGCGTT TGAACTGCTC
GAGCGCTACG GTGTCACCAA CACGTTCCTG TTCCCGACCG CGCTCAAGCA GATGATGAAG
GCCTGCCCGA CCCCGTCGGA CCACTACCAG CTCAAGCTGC GGGCCATCAT GAGCGCCGGC
GAGGCCGTCG GCGAAACGGT TTTCACCTGG TGCCGCGATG CGCTGGGCGT GATCGTCAAC
GAGATGTTCG GCCAGACCGA AATCAACTAC ATCGTCGGCA ACTGCACCGC GCAGTACGAC
GAAAGCCGCC TTGGCTGGCC TGCGCGACCT GGGTCGATGG GACGCCCCTA CCCCGGCCAT
CGCGTGGCCG TGATCGACGA GGACGGCCGC CCCTGCCCGC CGGGCGAGGA TGGCGAAGTC
GCAGTCTGCG CGACCGATAT CCACGGCCAT CCCGATCCGG TGTTCTTCCT GGGCTACTGG
AAGAACGAAG CGGCCACCGC GGCCAAGTAT TCGGAATATG ACGGCCTGCG CTGGTGTCGC
ACCGGTGACC TCGCGCGAAT CGACGCGGAT GGCTACCTCT GGTACCAGGG CCGCGCGGAC
GACGTGTTCA AGTCATCCGG CTACCGCATC GGGCCGAGCG AGATCGAGAA CTGCCTGCTC
AAGCATCCGG CGGTGTCGAA CTGCGCCGTG GTGCCGTCGC CGGACCCCGA GCGCGGCTCG
ATCGTCAAGG CGTTCATCGT GCTGACGCCG TCGGTGACGC GTTCCTTCGA TAACGATGCG
GCGCTGATCG CCGAACTCCA GCAGCATGTG CGAGGCCAGC TTGCGCCGTA CGAGTACCCG
AAAGCGATCG AATTCATCGA CCAGTTGCCG ATGACCACTA CCGGCAAGAT CCAACGCCGC
GTGTTGCGGC TGCAGGAACA GGAGCGCGCC GAAAAGCCAG CCGGCTAG
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| Protein sequence | MPDYSHFARS GRDRQPGDNR MTALPATRRD DYRALHDSFH WDVPEIFNLA EVCCGRWARD
PATMHRIAVY TEHEDGRRAS HTYAHIQAEA NRLSRALREL GVQRGDRVAI VMPQRIETVI
AGMAVYQLGA VAMPLSMLFG PEALSYRIDH SETRVAIADE TSIDNMLAAR PDCPTLRTVI
GVGDATGRGD LDWDTLLAAQ IPEFTAEQTK AEEAAVLIYT SGTTGPPKGA VIPHRALIGN
LTGFVCSQNW YPQDDDVFWS PADWAWTGGL WDALMPALYF GRPIVGYQGR FSAERAFELL
ERYGVTNTFL FPTALKQMMK ACPTPSDHYQ LKLRAIMSAG EAVGETVFTW CRDALGVIVN
EMFGQTEINY IVGNCTAQYD ESRLGWPARP GSMGRPYPGH RVAVIDEDGR PCPPGEDGEV
AVCATDIHGH PDPVFFLGYW KNEAATAAKY SEYDGLRWCR TGDLARIDAD GYLWYQGRAD
DVFKSSGYRI GPSEIENCLL KHPAVSNCAV VPSPDPERGS IVKAFIVLTP SVTRSFDNDA
ALIAELQQHV RGQLAPYEYP KAIEFIDQLP MTTTGKIQRR VLRLQEQERA EKPAG
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