| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1049 |
|---|
| Symbol | |
|---|
| ID | 4037846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1142484 |
|---|
| End bp | 1143365 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637976430 |
|---|
| Product | transglutaminase-like protein |
|---|
| Protein accession | YP_583204 |
|---|
| Protein GI | 94309994 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.085714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.734102 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTGG CGCGAGATAT ACCCGTGAAA TACAAGATCC ACCATAAGAC CATCTATCGA
TACACCGAGC CGGTGCGCCG CAGCGTGCAT GAGCTGCGTC TGGCGCCCCG CAGTGGCCCA
CTGCAGTCCG TGCAGTACTG GACGCTTTCC GCGCCGGGTA ACTTGTCCGA AGCGCGTGAC
GGTTTCGGCA ATATCGTCCA CAACTTCACG ATGGCCGGCC CGGCCCGTAC GATTGCGATC
GTTGCTACCG GCGAGGTCGA GGTCAGGATC GATCCAGCCC CAACGGGCCA GGCGGGCGCC
GAGGCCGGGG AGGGCGGTCA TGGCGCTTTC CAGGACCTGC CCGAAGCTGG TGAGTCGCGT
GTGTCGCCGC TCTATTTTCT ATCGGGCACG CCGCTGACAC AGGCGCCTGC GGACATGCAG
GCGTTCGCAG CCCCGTACCT GGCCGCTGGC CACGAGGTGC CGGCCCTGCT GGCATTGGCC
GATGGCATCG CCGAGCGGGT CCAGTACCGG GCCAATACGA CCGATGTCGG CACGTCCGCC
GTCGAGGCTT TCCGGCTAGG CAGCGGGGTC TGCCAGGATC AGGCACAGGT TATGGTGGCG
GCATGTCGCG CGCTCGGTAT TCCGGCGCGC TATGTCAGTG GCTACTTCTA CGATGCGGCC
GCAGCCTCGC TGGCCAGTCA TGCCTGGGCC GACATCTGCC TGGATGCGGA CCGCGGGCTC
TGGTGCAGCA TCGATGTCAC GCATCGCTGC ATCACCGATG GGCGCCACGT CCGCCTTGCT
GTGGGGCGTG ACTATGCCTC GGCCGCACCA ATCCGGGGCA TCCTCGAAGG CGGGGCGGGG
GAAACAATGG AAGTCGACAT CGAGATCACG CCGCTGGCCT GA
|
|---|
| Protein sequence | MHVARDIPVK YKIHHKTIYR YTEPVRRSVH ELRLAPRSGP LQSVQYWTLS APGNLSEARD
GFGNIVHNFT MAGPARTIAI VATGEVEVRI DPAPTGQAGA EAGEGGHGAF QDLPEAGESR
VSPLYFLSGT PLTQAPADMQ AFAAPYLAAG HEVPALLALA DGIAERVQYR ANTTDVGTSA
VEAFRLGSGV CQDQAQVMVA ACRALGIPAR YVSGYFYDAA AASLASHAWA DICLDADRGL
WCSIDVTHRC ITDGRHVRLA VGRDYASAAP IRGILEGGAG ETMEVDIEIT PLA
|
|---|
| |