Gene Rmet_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1047 
Symbol 
ID4037844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1139863 
End bp1141338 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content64% 
IMG OID637976428 
Producthypothetical protein 
Protein accessionYP_583202 
Protein GI94309992 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0100959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.237533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGC GGTTTTTCGA CGAGATGCTG GAAGGGCGAG AGGACGGAGC AACCGAGGCC 
ATCGAGGCCG GGCGGGCGCT GCCGTCGGGG GCGGTCAGGC CCCACTACCG GAACTTTGCC
GAATGGCTGG GACGGCAGTC CGCGGCGACG ATGAGCAACA AGCGCGCGGA AGCGGATCTG
ATCTTCCGGC GCGTGGGTAT CACCTTTGCC GTCTACGGCG ACAAGGATGA GTCCAACAGC
GGGACCGAGC GGACCATTCC GTTCGACGTG ATCCCGCGCA TTTTCCCGGC CAGCGAGTGG
GGCACGCTCG AGCGCGGCCT GCGGCAACGC GTTGCGGCGC TAAACCGCTT CATCCACGAC
ATCTACCACG GGCAGGACAT CATCCGTGCC GGCGTGATTC CGCCGGACCA GATCTACAAC
AATGCGCAGT ACCGCCCGGA AATGCTGGGC ATCGACGTGC CTCGTGACAT CTACGCGCAC
GTGGCCGGCA TCGACGTCGT ACGTGCGGGC GAGGGCGAGT TCTACGTTCT CGAAGACAAC
CTGCGGGTGC CATCGGGCGT GTCGTACATG CTCGAGAACC GCAAGATGAT GATGCGGTTG
TTCCCCGATC TGTTCGCCCG CAACCGCGTG GCCCCGGTGG CGCACTATCC CGATCTGCTG
CTGGACATGC TGCGCAGCGT GTCGCCGCAG AATATCGCCG ATCCGACCGT CGTCGTGCTC
ACGCCGGGCA TGTATAACTC AGCCTATTTC GAGCACGCGT TCCTGGCCCA GCAGATGGGC
GTCGAACTGG TGGAAGGCAA TGACCTGTTC GTCGAGGACG ACCACCTCTA CATGCGCACC
ACGCAGGGGC CGCAGCGTAT CGACGTGATC TACCGGCGCG TGGACGACGA TTTTCTCGAT
CCACTCGTTT TTCGCCACGA TTCCGCGCTG GGTGCGGCCG GGCTGCTCTC GGTCTACCGT
GCCGGCAACG TGACGATCAG CAATGCGATC GGGACGGGCG TGGCCGACGA CAAGTCGATC
TACCCGTACG TGCCGGACAT GATCCGCTTC TATCTCGGCG AGGAACCCAT CCTGTCGAAC
GTGCCGACCT ACATGTGCCG GCGTCCGGAT GATCTGCAGT ACGTGCTCGA CCATATGCAG
GATCTTGTGG TCAAGGAAAC GCATGGCGCC GGCGGCTACG GCATGCTCGT GGGACCGGCT
GCGACGCGCG CGGAGATTGA CCAGTTCCGG GAGGTCGTGA AATCGCGCCC CGAGCAGTAC
ATCGCGCAGC CGACGCTGGC GTTGTCGACT TGTCCGACCT ATGTCGATGC GGGCATCGCG
CCGCGCCATA TCGACCTTCG CCCGTTCGTG CTGTCGGGCA AGGAGGTGCG CATGGTGCCG
GGCGGGCTGA CGCGGGTGGC GTTGAGAGAG GGCTCGCTCG TGGTCAATTC GTCCCAGGGC
GGCGGTACCA AGGACACCTG GGTGCTGGAA CGCTAG
 
Protein sequence
MAARFFDEML EGREDGATEA IEAGRALPSG AVRPHYRNFA EWLGRQSAAT MSNKRAEADL 
IFRRVGITFA VYGDKDESNS GTERTIPFDV IPRIFPASEW GTLERGLRQR VAALNRFIHD
IYHGQDIIRA GVIPPDQIYN NAQYRPEMLG IDVPRDIYAH VAGIDVVRAG EGEFYVLEDN
LRVPSGVSYM LENRKMMMRL FPDLFARNRV APVAHYPDLL LDMLRSVSPQ NIADPTVVVL
TPGMYNSAYF EHAFLAQQMG VELVEGNDLF VEDDHLYMRT TQGPQRIDVI YRRVDDDFLD
PLVFRHDSAL GAAGLLSVYR AGNVTISNAI GTGVADDKSI YPYVPDMIRF YLGEEPILSN
VPTYMCRRPD DLQYVLDHMQ DLVVKETHGA GGYGMLVGPA ATRAEIDQFR EVVKSRPEQY
IAQPTLALST CPTYVDAGIA PRHIDLRPFV LSGKEVRMVP GGLTRVALRE GSLVVNSSQG
GGTKDTWVLE R