| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1045 |
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| Symbol | |
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| ID | 4037842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1137061 |
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| End bp | 1138950 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637976426 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_583200 |
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| Protein GI | 94309990 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00269183 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.140285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG CCGTTCTTGC CGAGGTACTG GCCGTCACGC AACGTATCGT CGACCGCAGT
CGCGCCAGCC GGGCGGCCTA TCTAGCCAGA TGCGAGCGCG CCCAGCAGGA ACTCGGGCCC
TTGCGCGGCA TGTCCTGCGC GAACCTTGCC CACGGCTACG CCGCACTGCC TTCGGACGAT
AAGCTCAAGC TGCGGGTCGA ACATGCCCCG AATCTCGGCA TCGTGACCGC CTACAACGAC
ATGCTGTCCG CCCACCAGCC CTATGAGCGT TACCCGGCCG TGATTCGCGA GGCCGCGCGC
GCCGTGGGTG GCGTGGCGCA GGTGGCGGGT GGCGTGCCGG CCATGTGTGA CGGGATTACC
CAGGGCAACG CCGGCATGGA GTTGTCGTTG TTCTCGCGCG ATGCGATCGC GATGGGCACG
GCCGTTGCGC TGTCGCACAA CACGTTCGAT GCAGCGCTGA TGCTGGGCGT GTGCGACAAG
ATCGTGCCGG GTTTGCTGAT GGGGGCGCTG CAGTTTGGCC ATCTGCCGAT CGTGTTCGCC
CCGGCCGGGC CGATGGCAAC GGGCCTGTCG AACAAGGAAA AGGCGCGTGT GCGCCAGCTC
TATGCCACCG GGCAGGTCGG GCGCGATGCG TTGCTGGAGG CCGAATGCGC CGCCTATCAC
GGCGCGGGTA CCTGCACCTT CTATGGCACC GCCAATAGCA ACCAGTTCCT GATGGAGATC
ATGGGCCTGC ACATGCCCGG CTCGGCGTTC GTGCATCCGG ACAGCGGCCT GCGTGACCCG
CTCACCGCCG CGGCAGCCCA GCGGGCGCTG GCCCTGATCG CTCGCGGTGA CGCCTATACC
CCGCTGGCGA AGATTGTCGA CGAACGGGCG ATCGTCAACG CGATGGTTGG CCTGCTGGCC
ACTGGCGGCT CGACCAACCA CACGATTCAC CTGGTGGCGA TGGCGCGCGC CGCCGGCATC
CTGATCGACT GGAACGATTT CGACTGCCTG TCAGCGATCA CGCCATTGCT GGCGCGTGTG
TATCCGAATG GCTCGGCCGA TGTGAACCAT TTCCACGCAG CGGGCGGCGT GGCCTATGTG
ATTGCCCAAC TGCTCGACGC CGGTCTGCTG CACGAGGACG TGCAGACCGT GGCGGGCCCC
GGCCTGAAGC GCTACACCGA GGAGCCGGTC ATGAACGATG GCGTGCTGCG CTGGCGGGCT
GGCCCGGCCA CGAGCGGGGA TGAGTCGGTG CTGGCGCCAG CGTCGGCGCC GTTCTCACCC
GAGGGGGGGC TGCGGCTGAT GGCGGGCAAC GTGGGGCGCG GGGTGATCAA GGTCTCGGCC
GTGGCCGACG AGCACCGAGT GGTCGAGGCG CCGGCGCGAG TCTTCGATTC GCAGGAAGCG
CTGCAGGCCG CCTTCGAGGC AGGCGAACTT GATCGTGACG TAGTGGCCGT GGTGCGCTTC
CAGGGCCCGA ATGCCAATGG CATGCCCGAG TTGCACCGGC TTACCCCCGC GCTTGGCGCG
CTGCAGGATG CCGGACGCAA GGTCGCGCTG GTAACCGATG GCCGCATGTC GGGCGCGTCG
GGCAAGGTGC CCGCCGTGAT CCATGTCGGG CCGGAGGCGC TGGCAGGCGG GCCGCTGGCT
CGGGTGCGCG ACGGCGACGT CATTCGCGTG GACGCATTGG CGGGCACGCT CGATCTGGTG
GGTGATGCTG CCACCCAGGC TGACTTTGCC GGGCGAGTGC CGGCAGCGGC GCCAGTCGAC
GAATTCACCC GTTTCAGCAT GGGCCGGGGC CTGTTCGGCC TGTTCCGCCG CCATGCGCGG
GCCGCCGAGG AGGGGGGCAG CGCGCTGGAC CTGTCCGAAG CCGATGCTCT GGCACCCGCT
GTCCAAACGG CGTCCGCCGT CGCACAATAG
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| Protein sequence | MSQAVLAEVL AVTQRIVDRS RASRAAYLAR CERAQQELGP LRGMSCANLA HGYAALPSDD
KLKLRVEHAP NLGIVTAYND MLSAHQPYER YPAVIREAAR AVGGVAQVAG GVPAMCDGIT
QGNAGMELSL FSRDAIAMGT AVALSHNTFD AALMLGVCDK IVPGLLMGAL QFGHLPIVFA
PAGPMATGLS NKEKARVRQL YATGQVGRDA LLEAECAAYH GAGTCTFYGT ANSNQFLMEI
MGLHMPGSAF VHPDSGLRDP LTAAAAQRAL ALIARGDAYT PLAKIVDERA IVNAMVGLLA
TGGSTNHTIH LVAMARAAGI LIDWNDFDCL SAITPLLARV YPNGSADVNH FHAAGGVAYV
IAQLLDAGLL HEDVQTVAGP GLKRYTEEPV MNDGVLRWRA GPATSGDESV LAPASAPFSP
EGGLRLMAGN VGRGVIKVSA VADEHRVVEA PARVFDSQEA LQAAFEAGEL DRDVVAVVRF
QGPNANGMPE LHRLTPALGA LQDAGRKVAL VTDGRMSGAS GKVPAVIHVG PEALAGGPLA
RVRDGDVIRV DALAGTLDLV GDAATQADFA GRVPAAAPVD EFTRFSMGRG LFGLFRRHAR
AAEEGGSALD LSEADALAPA VQTASAVAQ
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