| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1041 |
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| Symbol | |
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| ID | 4037838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1131465 |
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| End bp | 1132214 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637976422 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_583196 |
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| Protein GI | 94309986 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.658094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGATA CGACGCTGCT CCCCGAAGCC TCATTCCAGG CCGGCACCCA AGGCCCTGGC
ACGCCAACCG GCACGCCGGT CCTGCTGGGC GAGGGCCTGA CCAAGCGTTT CAAACAGGGC
GGCCTGGACG TCGAAGTCCT GCGTGGCGTC GATGTGCGCG TTGACGCTGG CGAGAAGGTG
GCCATCGTCG GTGCTTCCGG TTCGGGCAAA TCGACACTGC TGCACGTGCT GGGCGGGCTC
GACAACCCCG ACGCCGGCCG CGTGGCGCTG CTGGGCAAGC CGTTCACGGC GCTGCGCGAG
AAGCAGCGCA ATATCGTGCG CAACCGCTCG CTGGGCTTCG TCTATCAGTT TCACCATCTG
CTGCCGGAGT TTACGGCGCT CGACAACGTG GCGATGCCAA TGCGCATCCG CGGCCTGAGC
GAGCCCGCCG CGCGCGCCGA GGCGCAGGCC GTTCTTGAGC GCGTGGGGCT TGGCGGCCGC
TCGAAGCACC GCCCCGGCGA ACTCTCGGGC GGCGAGCGCC AGCGCGTGGC AATTGCCCGC
GCGCTGGTCG GAAAGCCGGC CTGCGTGCTG GCCGACGAGC CGACCGGCAA CCTTGACGAC
CACACGGCAG GCGGCGTGTA CGACCTGATG CTGGAGCTGT CACGCACGCT GGGCACGAGC
TTCGTGATCG TCACCCACGA CCTCGACCTG GCTGGCCGTT GCGACCGCGT GCTGCGGCTG
CGCGACGGTC ACTTGCATCA AGAGCGTTGA
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| Protein sequence | MSDTTLLPEA SFQAGTQGPG TPTGTPVLLG EGLTKRFKQG GLDVEVLRGV DVRVDAGEKV
AIVGASGSGK STLLHVLGGL DNPDAGRVAL LGKPFTALRE KQRNIVRNRS LGFVYQFHHL
LPEFTALDNV AMPMRIRGLS EPAARAEAQA VLERVGLGGR SKHRPGELSG GERQRVAIAR
ALVGKPACVL ADEPTGNLDD HTAGGVYDLM LELSRTLGTS FVIVTHDLDL AGRCDRVLRL
RDGHLHQER
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