| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1034 |
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| Symbol | lysS |
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| ID | 4037831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1122634 |
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| End bp | 1124181 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976415 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_583189 |
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| Protein GI | 94309979 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.269597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CGACCCGCGC CCAAGCCGCC ACGCCCACCA CCGAAGGGCT TGCCGTAGAT
GAGAACAAGA TCATCGCCGA GCGGCGCGAG AAACTGCAGG CCCTGCGCCA GCAAGGCGTG
GCCTTCCCCA ACGATTTCCA GCCGACGCAC CAGGCCGGCG CGCTGCACGC GCAGTATGGC
GAAACGGACC AGGCCACGCT GGAAGCCAGC CCCGTGGAAG TGTCCATCGC CGGACGCATG
ATGCTCAAGC GCGTGATGGG CAAGGCCAGC TTCGCCACGG TCCAGGACGG CAGCGGCCAG
ATCCAGTTCT ACATCACGCG CGACAAGGTC GGTGAAGACG TCTATGCCGC GTTCAAGCAC
TGGGACCTCG GCGACATCAT CAGCGCGCGC GGAGAACTGT TCCGCACGAA CAAGGGCGAG
TTGTCGGTGC AGGTGCGCGA ACTGCGCCTG CTGTCGAAGG CACTGCGTCC CCTGCCGGAC
AAGTTCCATG GCCTGGCCGA CCAGGAAACC AAATACCGCC AGCGCTATGT GGACCTGATC
GTCTCGCCGG AAACGCGCAG CACGTTCCGC GCCCGCACCC AGGCCATCTC GTCGATCCGC
CGCCATATGG CCGATGCCGG CTTTATGGAA GTGGAAACGC CGATGCTGCA CCCGATTCCG
GGTGGCGCGG CGGCCAAGCC GTTCATCACG CACCACAACG CACTGGACAT GCAGATGTTC
ATGCGCATCG CGCCCGAGCT CTATCTGAAG CGCCTGATCG TCGGCGGCTT CGAGCGCGTG
TTCGAAATCA ACCGCAACTT CCGTAACGAA GGGGTGAGCC CGCGCCACAA CCCCGAGTTC
ACGATGATGG AGTTCTACGC GGCCTACACG GATTACCGTT GGCTGATGGA CTTCACCGAG
AACCTGATCC GTCAGGCCGC AATTGACGCG CGTGGCAGCG CCACGGTGAC GTACCAGGGC
CGCGAACTTG ATCTGTCCAA GCCGTTCCAT CGCCTGACGA TCTGCGGGGC GATCCAGAAG
TACGCGCCGG AATACACCGA CGCGCAGCTT GCCGATGCCG ACTTCCTGCG CGCCGAGCTC
AAGAACAAGT TCAAGATCAA TACCAGCGCG CCGCAGTTCC TGAACGCCGG CCTGGGCACG
CTGCAACTGG TGCTCTTCGA GGAAACCGCC GAAGCGCAAC TCTGGGAACC GACCTACATC
GTCGACTACC CGGTCGAGGT ATCGCCGCTG GCGCGCGGCT CGGACACGCA GCCGGGCATT
ACCGAACGCT TCGAACTGTT CATCACGGGC CGCGAGATCG CCAACGGCTT CTCCGAGCTT
AACGACCCGG AAGACCAGGC CGAACGTTTC CGCAAGCAGG TCGAGCAGAA GGATGCGGGC
GACGAGGAAG CGATGTACTT CGACGCCGAT TACATCCGCG CGCTCGAGTA CGGCATGCCT
CCGACAGGCG GCTGCGGTAT CGGCATCGAC CGCCTGGTGA TGCTGCTGAC CGACAGCCCG
AACATCCGCG ACGTAATCCT GTTCCCGCAC CTGCGCCGCG AGGACTGA
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| Protein sequence | MTEPTRAQAA TPTTEGLAVD ENKIIAERRE KLQALRQQGV AFPNDFQPTH QAGALHAQYG
ETDQATLEAS PVEVSIAGRM MLKRVMGKAS FATVQDGSGQ IQFYITRDKV GEDVYAAFKH
WDLGDIISAR GELFRTNKGE LSVQVRELRL LSKALRPLPD KFHGLADQET KYRQRYVDLI
VSPETRSTFR ARTQAISSIR RHMADAGFME VETPMLHPIP GGAAAKPFIT HHNALDMQMF
MRIAPELYLK RLIVGGFERV FEINRNFRNE GVSPRHNPEF TMMEFYAAYT DYRWLMDFTE
NLIRQAAIDA RGSATVTYQG RELDLSKPFH RLTICGAIQK YAPEYTDAQL ADADFLRAEL
KNKFKINTSA PQFLNAGLGT LQLVLFEETA EAQLWEPTYI VDYPVEVSPL ARGSDTQPGI
TERFELFITG REIANGFSEL NDPEDQAERF RKQVEQKDAG DEEAMYFDAD YIRALEYGMP
PTGGCGIGID RLVMLLTDSP NIRDVILFPH LRRED
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