Gene Rmet_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1033 
Symbol 
ID4037830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1121652 
End bp1122356 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content65% 
IMG OID637976414 
Product17 kDa surface antigen 
Protein accessionYP_583188 
Protein GI94309978 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.244609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGTC CGGAAACCCT CCCCTCCTTG CCGACCCAAC GCCGCCTGAA TCCGCTGATT 
GGCGCGGCGG CTGTGTCGAT CGTCGTTGCC AGCCTCGCGG CCGTGGCAGC GATCACGGGT
GTGCTGCCGA TCAGCAAGGC CAACCAAGGT GGCACCGAGC CCACCGCGGC ACAGTACAAC
GCGCAACCCG CCACGCAAGC GGAGACGCAA ACACCTGCAC CCGGCTCGAC CACACGCCCG
CCGGCCTATG ACAGGCAGTA CGCCCAAAAC GCAATGCCAC AGGCGCCTGC CCAGCAGCAG
CAGCAGCAAC AACAACAACA ACAACAACAA CAACAACCGT CGCAGACCGA GCCGAATACC
GCCGCACGGG CCAGCCATAC GGCTGGCCAT GTAACCGGCG TGCAAGCGGT GGAATCTGAA
AAGCCGACCT CCGGTCTTGG CGCGGTGGGT GGTGCGGTAG TGGGCGGCCT GCTCGGCAAC
CAGATCGGCA GCGGCAATGG CCGCATACTG GGGACTGTCG CGGGCGCGGC AGCCGGCGGC
TTCGGCGGCA ACTATGCCGA GAAGAAGCTG AACACGAACA AGTCCTACCG CGTCAGCGTG
CAGATGGACG ACGGCTCGCG CCGCACGTTC ACTTACCAGA ACCCTCCGGG TGTGGAAGTT
GGACAGCGCG TGCACCTCGA GCGTGGTGTG CTGGTGACGG GCTGA
 
Protein sequence
MSGPETLPSL PTQRRLNPLI GAAAVSIVVA SLAAVAAITG VLPISKANQG GTEPTAAQYN 
AQPATQAETQ TPAPGSTTRP PAYDRQYAQN AMPQAPAQQQ QQQQQQQQQQ QQPSQTEPNT
AARASHTAGH VTGVQAVESE KPTSGLGAVG GAVVGGLLGN QIGSGNGRIL GTVAGAAAGG
FGGNYAEKKL NTNKSYRVSV QMDDGSRRTF TYQNPPGVEV GQRVHLERGV LVTG