Gene Rmet_1029 details

Gene Information

• Locus tag: Rmet_1029
• Symbol: hscA
• ID: 4037826
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cupriavidus metallidurans CH34
• Kingdom: Bacteria
• Replicon accession: NC_007973
• Strand: +
• Start bp: 1117994
• End bp: 1119859
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637976410
• Product: chaperone protein HscA
• Protein accession: YP_583184
• Protein GI: 94309974
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.175393
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.210751
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCACTGC TCCAGATTTC CGAACCCGGC ATGTCGCCGG CGCCCCATCA GCGCCGATTG 
GCCGTGGGTA TCGACCTTGG CACCACCAAC TCGCTGGTGG CCGCCGTGCG CAACAGCATT 
CCCGAAGTCC TGCCCGACGA GCACGGCCGC GCGCTGCTGC CGTCCGTGGT GCGTTATTTG 
CCGAATGGCA ACGCGCATAT CGGCTACAAG GCCCAGGACG AGGCCGTGCG CGACCCCAAG 
AACACGATCA TTTCGGTCAA GCGCTTCATG GGCCGTGGCG TGCGCGACGT GGCCAATATC 
GAGCACAGCC TGTACGACTT TGTCGATGCG CCGGGCATGG TCCAGCTGAA GACCGCCGCC 
GGCATCAAGA GCCCGGTGGA AGTCTCGGCC GAGATCCTGG CCACGCTGCG CCAACGCGCG 
GAAGACTCGC TTGGTGATGA ACTGGTCGGT GCCGTGATCA CTGTGCCGGC GTACTTCGAC 
GATGCGCAGC GTCAAGCCAC CAAGGATGCC GCTCAACTGG CGGGCCTCGA GGTGCTGCGC 
CTGCTCAACG AGCCGACCGC CGCCGCGATT GCCTACGGTC TCGACAACGC CGCGGAAGGC 
ATCTACGCCG TATATGACCT GGGCGGCGGC ACCTTTGACA TCTCGGTGCT CAAGCTGACC 
AAGGGTGTGT TCGAAGTGAT GTCGACGGGC GGAGATTCGG CGCTCGGTGG CGACGACTTC 
GACCAGCGCC TGCTGTGCTG GATCGTCGAG CAGGTCGGTC TGCAACCCTT GTCTGCCGAA 
GACTCGCGTC TGCTGATGGT GCGCGCCCGC GCGGCGAAGG AAGCGCTGTC GTCCAGTGAC 
AGCACGGTGA TTGACGCCGT GCTGACGAGC GGCGAGATCG TGCATCTCAC GCTGGATGCC 
GATACCTTCA TACAGATCAC CGCCAATCTG GTGCAGAAGA CGCTGACGCC GGTACGCAAG 
GCGCTGCGTG ACGCCGGTGT CGGTCCCGAG GACGTGAAGG GCGTGGTCCT GGTGGGCGGC 
GCCACGAGAA TGCCGGCAAT CCGCAAGGCG GTGGGTGACT ACTTCGGTCA GCAGCCGCTG 
ACCAACCTCG ATCCGGACCG GGTTGTGGCG CTGGGCGCGG CCATGCAGGC CAACCTGCTG 
GCCGGCAACC ATGCGCCGGG CGAGGATTGG CTGCTGCTCG ACGTGATCCC GCTCTCGCTG 
GGCGTGGAAA CGATGGGTGG GCTGGTCGAG AAGATCGTCC CGCGCAACAG CACGATTCCC 
GTGGCGCGCG CGCAGGAGTT CACCACGTTC AAGGACGGCC AGACCGCAAT GGCGATTCAC 
GTGCTGCAAG GCGAGCGCGA GCTGGCCAGC GACTGCCGTT CGCTGGCGCG CTTCGAACTG 
CGCGGCATTC CGCCGATGGT GGCCGGCGCG GCGCGTATCC GCGTGACCTA CCAGGTGGAT 
GCTGACGGCC TGCTGTCAGT GTCGGCCCGC GAGACCGGTT CCGGGGTGGA AGCATCGGTG 
TCGGTCAAGC CTTCGTATGG CCTGGCCGAT GACGATATCG CCCGCATGTT GCAGGAGAGC 
TTCCAGGAAG CCGAGCACGA CATGAAGAAC CGCGCGCTGG CCGAGGAACG CGTGGAAGCC 
GCGCGTCTGG TGGAAGCCAC CACGCGTGCG CTCGAAACCG ACGGCAACCT GCTGTCCGCC 
GACGAGCGTG CCGCAGTCGA CGAGTTGATG GCCAATGTGA GCGAAATCGC CAAGGGCGAG 
GACCATCGCG CGATCAAGGC GGCGGTCGAA CGCCTCTCGC AAGGCACCGA CGAGTTTGCC 
GCACGCCGCA TGGACCGCTC GATCAAGAGC GCGCTGGCCG GCAAGAAGGT TCAGGAAATC 
GGCTGA 

 

Protein sequence

MALLQISEPG MSPAPHQRRL AVGIDLGTTN SLVAAVRNSI PEVLPDEHGR ALLPSVVRYL 
PNGNAHIGYK AQDEAVRDPK NTIISVKRFM GRGVRDVANI EHSLYDFVDA PGMVQLKTAA 
GIKSPVEVSA EILATLRQRA EDSLGDELVG AVITVPAYFD DAQRQATKDA AQLAGLEVLR 
LLNEPTAAAI AYGLDNAAEG IYAVYDLGGG TFDISVLKLT KGVFEVMSTG GDSALGGDDF 
DQRLLCWIVE QVGLQPLSAE DSRLLMVRAR AAKEALSSSD STVIDAVLTS GEIVHLTLDA 
DTFIQITANL VQKTLTPVRK ALRDAGVGPE DVKGVVLVGG ATRMPAIRKA VGDYFGQQPL 
TNLDPDRVVA LGAAMQANLL AGNHAPGEDW LLLDVIPLSL GVETMGGLVE KIVPRNSTIP 
VARAQEFTTF KDGQTAMAIH VLQGERELAS DCRSLARFEL RGIPPMVAGA ARIRVTYQVD 
ADGLLSVSAR ETGSGVEASV SVKPSYGLAD DDIARMLQES FQEAEHDMKN RALAEERVEA 
ARLVEATTRA LETDGNLLSA DERAAVDELM ANVSEIAKGE DHRAIKAAVE RLSQGTDEFA 
ARRMDRSIKS ALAGKKVQEI G