Gene Rmet_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1027 
Symbol 
ID4037824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1117060 
End bp1117401 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content60% 
IMG OID637976408 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_583182 
Protein GI94309972 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00699408 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.267382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGACA GCAAGGCAAA GATGATCTCA ATGACCGAAA AGGCGGCCAA GCACGTCGCC 
CGATACCTGG AACGCCGCGG CAAGGGCGTG GGCCTGCGCG TGGGCGTGAA GACGACTGGC
TGTTCGGGTC TGGCGTACAA GCTTGAGTAC GTCGATGAAG TGCTGCCCGA AGACCAGGTG
TTCGAAACGC ACGGCATCAA GGTGATCGTG GACCCGAAGA GCCTGCCGTA CATCGACGGC
ACCGAGCTGG ATTTCGCACG CGAAGGGTTG AACGAAGGCT TCAAGTTCAA CAACCCCAAC
GTCAAGGACG AGTGCGGCTG CGGCGAGTCG TTCCGGGTCT GA
 
Protein sequence
MFDSKAKMIS MTEKAAKHVA RYLERRGKGV GLRVGVKTTG CSGLAYKLEY VDEVLPEDQV 
FETHGIKVIV DPKSLPYIDG TELDFAREGL NEGFKFNNPN VKDECGCGES FRV