| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1025 |
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| Symbol | |
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| ID | 4037822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1115331 |
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| End bp | 1116551 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637976406 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_583180 |
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| Protein GI | 94309970 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00998384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.30784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA CCCCACATTT CCCGATCTAC ATGGATTACT CGGCAACGAC GCCGGTGGAC
CCGCGCGTGG CCGACAAGAT GATTCCGTAC CTGCGCGAGC AGTTCGGTAA TCCGGCGTCG
CGTAGCCACG CGTATGGCTG GGACGCCGAG CGCGCCGTGG AAGAGGCGCG CGAGCAGGTG
GCCGCGCTGG TCGACGCCGA TCCGCGCGAA ATCGTCTGGA CGTCGGGCGC GACCGAGTCG
GACAACCTCG CCATCAAGGG CGCGGCGAAT TTCTACTCGG GCAAGGGCAA GCACATCATC
ACCGTGAAGA CCGAGCACAA GGCCGTGCTC GATACCACGC GCGAACTGGA GCGTCAGGGC
TTCGAGGTGA CGTACCTCGA CGTCAAGGAT GACGGCCTGA TCGACATGGA TGTGTTCAAG
CAGGCGATTC GCCCGGACAC GATCCTGGTG TCGGTGATGC TCGTGAACAA TGAGATTGGT
GTGATCCAGG ACGTCGAGCA GATCGGTGAG ATCTGCCGCG AGAAGGGCAT CATCTTCCAT
TGCGACGCCG CGCAGGCGAC CGGCAAGGTG ACCATCGACC TGAGCACGCT GAAGTGCGAC
CTGATGTCGT TCTCGGCCCA CAAGACCTAT GGTCCGAAGG GCATCGGCGC GCTGTATGTT
CGCCGCAAGC CGCGCGTGCG CATCGAAGCG CAAATGCACG GCGGCGGTCA CGAGCGTGGC
ATGCGTTCGG GCACGCTGGC CCCGCACCAG ATCGTCGGCA TGGGCGAGGC ATTCCGTCTG
GCCCGCGAGG AAATGGCCAC GGAAAACGAA CGTATCCGGA TGCTGCGCGA CCGCCTGTGG
AATGGTCTGT CGAGCATGGA AGAGGTGTAT CTGAACGGTT CGATGGAACA CCGCGTGCCG
CACAACCTCA ACGTCAGCTT CAACTTCGTC GAGGGTGAGT CGCTGATCAT GGCGATCAAG
GATGTGGCCG TGTCGTCGGG TTCGGCCTGC ACGTCGGCTT CGCTGGAGCC GTCGTACGTG
CTGCGCGCCC TTGGGCGCAA TGACGAACTG GCGCACAGCT CGATCCGTTT CACCGTGGGC
CGCTTCACGA CCGAAGCCGA AATCGACTAC ACCGTCGAAC TGCTCAAGAA CAAGATCGGC
AAGCTGCGCG ACCTGTCGCC GCTGTGGGAA ATGTTCAAGG ACGGCGTCGA CCTGAATTCG
ATCCAGTGGG CCGCGCACTG A
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| Protein sequence | MSTTPHFPIY MDYSATTPVD PRVADKMIPY LREQFGNPAS RSHAYGWDAE RAVEEAREQV
AALVDADPRE IVWTSGATES DNLAIKGAAN FYSGKGKHII TVKTEHKAVL DTTRELERQG
FEVTYLDVKD DGLIDMDVFK QAIRPDTILV SVMLVNNEIG VIQDVEQIGE ICREKGIIFH
CDAAQATGKV TIDLSTLKCD LMSFSAHKTY GPKGIGALYV RRKPRVRIEA QMHGGGHERG
MRSGTLAPHQ IVGMGEAFRL AREEMATENE RIRMLRDRLW NGLSSMEEVY LNGSMEHRVP
HNLNVSFNFV EGESLIMAIK DVAVSSGSAC TSASLEPSYV LRALGRNDEL AHSSIRFTVG
RFTTEAEIDY TVELLKNKIG KLRDLSPLWE MFKDGVDLNS IQWAAH
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