| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1023 |
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| Symbol | |
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| ID | 4037820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1112492 |
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| End bp | 1114603 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976404 |
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| Product | putative site-specific recombinase transmembrane protein |
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| Protein accession | YP_583178 |
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| Protein GI | 94309968 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4389] Site-specific recombinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.926056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.592134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGTT CCCTGTTTCG AAAGTGGCGC GAGTCACGCA ATGCCAGCCT GCAGCTGGAT
GCCATCCTGG CCGCGGCCGA CCCCGATGCG CTGCTCGCCG ACCGAAATCA ATGGCTGATC
GAACTCGCCT ACTGGCTGCG CCGGGACGGC AATCTCGATG CCGGCGCGGA GGCGGGCGGG
GCCGGCAGCC GCAGTTTCCC GGTCCATGTT CGCCTGCGTT ACCTGCTACA GGTGCTGGCC
CGGCATCCCG ACTGGGCCGA CAGCTTCGCC CGCACGGTCC GCTCGATCGT GCGCGACAAC
GATCCGACCT CGCTGTTCTG CGATACCGGC GTGGCCTCCC ACCCGGGGAT CTGGAGCGAG
ATGGCAGACC GGCTCCAGGC GCGCTTCCTG CCGCCGCCTC CGAATCGCAG CGATATGGCA
GGTCTGTTCG CGCTGCTGTT TGTCGATGAG AACGACGCTG ACTGGGTAGA GGCACTCGAC
GACGAACTGG TCGAGCGGTT TGCCCAGGCG CTGCTGGTGG GCGCCGAGGA TGGTGCGGAT
GGTGGTGCGG AAGAAGGCGA TGGCGTCAAG CGCCTGCGCA AGGCGCGCGA GGCGACGCTG
ACGGCCAGCA TCCAGGTTCT GGTGAGCCAG GTGAGGGCGA CGGGGCTGAG TCAGGCGATC
CGCAGCCGCC TGCGCGGGCG CGTGGACGAG ACACCGTTCT TCCGCCTGGA CCGCGCCGTC
GCGGCATTGT GCGAGGACGG ACTGGCGCAC GATGATGGTG CATTCGTCCA TCGGCTCAAT
TACTTCCGCG GCCTGCTCGA CGGTTGCCAC GCAGCCGCGC GCCAGGTCTA CGAGGATCTC
GAGGAAAACG GTGTCTCCGT AGAAGTGGTG TTCCAGATCG AGCGGATGAA GGCTCGCCTG
GCACGTATCG ATCTGCTCCT CACCGCATGG GTTGATCCCT CGCACCATGG GCGGCACGCG
CACCTGATTG CCGAGTTGAT CCGGTCGACG CAGGCGCGGC GCAGCGTCGG GCATCTGATG
AGTTCGTCGT TCGCGCAACT CGCGCGCAAG GTCGTCGAGC GTTCGGCCGA GAGCGGCGAG
CACTACATCA CGCGCGATCG CAAGGAGTAT CGCGAACTGA TGCGCGCCGC GATGGGCGGT
GGTCTGGTTA CCGTCCTTAC CGTCTACCTG AAGTTCCTGA TCTACGGGCT TCACCTGGAC
AAGTTCATCG AAGGCTTCCT GGCCTCGCTG AACTACGCGG GCAGCTTCCT CGCGATCCAT
TTCGCACATT TCACGCTGGC CACCAAGCAG CCAGCCATGA CCGGGCCGGC GCTGGCGCAC
CGGCTCGACG GCGCGGGGCG GCCGGAAGGG CGCGAGATTT TCGTCGACGA CACGATCGCC
ATGATCCGGT CAAATGCGGC CGCGATCTTC GGCAACCTGT CCGTGGTGTT CCCGGTGGCG
CTGGCGATCG AGTGGGGCGT GGGCAAGGCG TTCGGCGCCC ACTTACTGAC GCCCGCGAAG
GCGATCGCGA CGATCGAATC GTTCTCGATC CTGGGTCCCA CGCCGCTCTA TGCGATCTTC
ACGGGCGTGC TGCTCTGGCT GTCGAGCCTG ATCGCGGGAT GGGCCGACAA CTGGTTCGCG
CTGCATCGCG TGCACGACGT CATGGCCTAC AACCGGCGCT TGCGCTATGT GCTCGGTCAA
CGCGGTGCGA TGCGCCTGGC CGATTTCTGG AAACGCAATC TCTCGGGCAT CACGGCCAAC
GTGTCGCTGG GCTTCCTGCT TGGGCTGGGG CCGGAGATCC TGAGCTTCTT TGGTCCGCAC
ATGGAAGTGC GTCATGTGAC GCTTTCGACT GGTTCGATCG GCGCGGCCAT TGGCGTGCTT
GGGCTCGATG CGCTGCGCAT GCCGTCCCTG TGGCTAGCGG TGGCGGGGAT CGCGCTGATG
GGGGTGTTGA ACGTGGCGGT GAGCTTCGCG CTGGCTTTCA ACATGGCGCT GCGCTCGCGC
AACCTGCGTC GGGTCGACCG GCGGGAAGTG GTGCGGGCGG TGCGTCAGCG CATTCTCCGG
CATCCGCTTT CATTGCTGAT TCCGCCGCGT AAAGCGCCGG ATTCGGCACC CGAGGGAAGC
CCGTCGTTAT AG
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| Protein sequence | MLRSLFRKWR ESRNASLQLD AILAAADPDA LLADRNQWLI ELAYWLRRDG NLDAGAEAGG
AGSRSFPVHV RLRYLLQVLA RHPDWADSFA RTVRSIVRDN DPTSLFCDTG VASHPGIWSE
MADRLQARFL PPPPNRSDMA GLFALLFVDE NDADWVEALD DELVERFAQA LLVGAEDGAD
GGAEEGDGVK RLRKAREATL TASIQVLVSQ VRATGLSQAI RSRLRGRVDE TPFFRLDRAV
AALCEDGLAH DDGAFVHRLN YFRGLLDGCH AAARQVYEDL EENGVSVEVV FQIERMKARL
ARIDLLLTAW VDPSHHGRHA HLIAELIRST QARRSVGHLM SSSFAQLARK VVERSAESGE
HYITRDRKEY RELMRAAMGG GLVTVLTVYL KFLIYGLHLD KFIEGFLASL NYAGSFLAIH
FAHFTLATKQ PAMTGPALAH RLDGAGRPEG REIFVDDTIA MIRSNAAAIF GNLSVVFPVA
LAIEWGVGKA FGAHLLTPAK AIATIESFSI LGPTPLYAIF TGVLLWLSSL IAGWADNWFA
LHRVHDVMAY NRRLRYVLGQ RGAMRLADFW KRNLSGITAN VSLGFLLGLG PEILSFFGPH
MEVRHVTLST GSIGAAIGVL GLDALRMPSL WLAVAGIALM GVLNVAVSFA LAFNMALRSR
NLRRVDRREV VRAVRQRILR HPLSLLIPPR KAPDSAPEGS PSL
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