| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1019 |
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| Symbol | |
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| ID | 4037816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1109264 |
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| End bp | 1111357 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637976400 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_583174 |
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| Protein GI | 94309964 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.231406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.390908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC TTGCTGAAGC CGCCCCCGCC CTGGATGAAG ACAAATTCGT CACGTTTCCG
GGGTCTCCAT TCCAGCTTTA TCAGCCGTAT TCGCCGGCGG GCGACCAGCC GGAGGCGATC
CGCCAACTGG TGGAGGGCGT GGAGGACGGC CTGTCGTACC AGACGCTGCT GGGCGTGACC
GGCTCCGGCA AGACCTTCAC GATGGCCAAC GTGATCGCCC GGATGGGCCG GCCGGCCATT
GTCTTCGCGC CAAACAAGAC GCTGGCGGCA CAGCTGTATT CCGAGTTCCG GGAGTTCTTC
CCGCGCAATG CGGTCGAGTA TTTCGTCAGC TACTACGACT ACTACCAGCC CGAAGCCTAC
GTGCCGCAGC GCGACCTGTT CATCGAAAAG GACTCGTCGA TCAACGAGCA TATCGAGCAG
ATGCGGCTGT CGGCGACCAA GAGCCTGCTG GAGCGGCGCG ACACGATCAT CGTCGCCACG
GTGTCGGCGA TCTACGGTAT CGGCAATCCG AGCGAATACC ACCAGATGAT CCTGACGCTG
CGTACTGGCG ACAAGATCAG CCAGCGCGAT GTCATCGCCC GCCTGATCGC GATGCAGTAC
ACGCGCAACG AGACCGACTT CCAGCGCGGC ACGTTCCGCG TGCGCGGCGA CACGCTCGAC
ATCTTTCCGG CCGAGCACGC CGAGATGGCG GTGCGCGTCG AACTGTTCGA CGACGAGGTG
GATTCGCTGC AGTTCTTCGA TCCGCTGACC GGCCGCGTGC GCCAGAAGAT TCCGCGTTTC
ACGGTCTATC CCTCGAGCCA CTACGTGACG CCGCGCGAAA CGGTGCTGCG CGCGATCGAG
GACATCAAGG TGGAGCTGCG CGAGCGGCTG GATTTCTTCT ACAAGGAGAA CCGCCTCGTA
GAGGCGCAGC GGCTCGAGCA GCGTACGCGG TTCGATCTGG AGATGCTCAC CGAACTGGGC
TTCTGCAAGG GCATCGAGAA CTATTCGCGC CATCTGTCGG GCGCGAAGCC GGGCGAGCCG
CCGCCGACGC TGGTTGACTA TCTGCCGCCA GACGCGCTGA TGTTCCTGGA CGAGTCCCAC
GTGCTGATCG GCCAGTTAAA CGGCATGTAC AACGGCGACC GCGCGCGCAA GACCACGCTG
GTCGAGTACG GCTTCCGCTT GCCCTCGGCG CTGGACAACC GACCGCTCAA GTTCGACGAG
TACGAGCGCA AGATGCGCCA GGCGGTGTTC GTGACAGCCA CTCCGGCGAA CTACGAGAAG
GAGCACGCGG GGCAGGTGGT CGAGCAGGTG GTGCGGCCGA CGGGCCTGGT CGATCCGGTG
ATCGAGGTGC GGCCCGCCAC GACGCAGGTG GACGACCTGC TTGGGGAGAT TCATCAGCGG
GTCAAGGTCA ATGAGCGTGT ACTGGTAACG ACGCTGACCA AGCGCATGGC GGAGCAACTG
ACCGAATTCC TTTCGGAAAA CGGCGTGAAG GTCCGCTACC TGCATTCGGA CATCGATACC
GTCGAGCGCG TGGAAATCAT TCGCGACCTG CGGCTTGGCA CGTTCGACGT GCTCGTGGGT
ATCAACCTGC TGCGCGAGGG GCTCGACATC CCCGAGGTGT CGCTGGTGGC GATCCTCGAT
GCGGACAAGG AGGGCTTCCT GCGCGCCGAG CGTTCTCTGA TCCAGACCAT CGGGCGCGCC
GCGCGTAACG TCAATGGCAC GGCCATCCTG TACGGCGATC GTATGACCGA CTCGATGAAG
GTGGCGATCC GGGAAACCGA GCGTCGCCGC GAGAAGCAGA TGGCCTTCAA CGAAGCCAAC
GGCATCACGC CGCGAGGCGT GGTCAAGCGC ATCAAGGACA TCATCGACGG GGTCTACAAC
GCCGACGACG TCAAGGCCGA ACTGACGGCC GCCGCCGAGC GGGCCAGGTA CGAGGACATG
AGCGAAAAGC AGGTGGCCAA GGAGATCAAG CGCCTGGAGA AGCAGATGCT CGACCACGCC
AAGAACCTGG AGTTCGAAAA GGCGGCCCAG GTGCGCGATC AACTCGCGAA GCTGCGGTCG
CAGGTGTTCG GGGCTGGGGC CGAAGGCGAT CATCTCCTGC CGCCGTCCGC GTAA
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| Protein sequence | MTNLAEAAPA LDEDKFVTFP GSPFQLYQPY SPAGDQPEAI RQLVEGVEDG LSYQTLLGVT
GSGKTFTMAN VIARMGRPAI VFAPNKTLAA QLYSEFREFF PRNAVEYFVS YYDYYQPEAY
VPQRDLFIEK DSSINEHIEQ MRLSATKSLL ERRDTIIVAT VSAIYGIGNP SEYHQMILTL
RTGDKISQRD VIARLIAMQY TRNETDFQRG TFRVRGDTLD IFPAEHAEMA VRVELFDDEV
DSLQFFDPLT GRVRQKIPRF TVYPSSHYVT PRETVLRAIE DIKVELRERL DFFYKENRLV
EAQRLEQRTR FDLEMLTELG FCKGIENYSR HLSGAKPGEP PPTLVDYLPP DALMFLDESH
VLIGQLNGMY NGDRARKTTL VEYGFRLPSA LDNRPLKFDE YERKMRQAVF VTATPANYEK
EHAGQVVEQV VRPTGLVDPV IEVRPATTQV DDLLGEIHQR VKVNERVLVT TLTKRMAEQL
TEFLSENGVK VRYLHSDIDT VERVEIIRDL RLGTFDVLVG INLLREGLDI PEVSLVAILD
ADKEGFLRAE RSLIQTIGRA ARNVNGTAIL YGDRMTDSMK VAIRETERRR EKQMAFNEAN
GITPRGVVKR IKDIIDGVYN ADDVKAELTA AAERARYEDM SEKQVAKEIK RLEKQMLDHA
KNLEFEKAAQ VRDQLAKLRS QVFGAGAEGD HLLPPSA
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