| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1008 |
|---|
| Symbol | |
|---|
| ID | 4037805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1098321 |
|---|
| End bp | 1099259 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637976389 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_583163 |
|---|
| Protein GI | 94309953 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.508617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCAT CCGCCACCGG CACCCTGGGC CACGCCCGCG ACAAGCTCGC GGGCGTGTTG
CTGATCGCGC TCTCCGCCAG CGCCTTCGGC GCCATGGCCA TCTTCGCGCG TTTTGCCTAT
GCAGCGGGGG CGGACGTCTA TGGCCTGCTG GCCGTGCGCT TCCTGCTGGC CGCGATTGCG
ATGGGCTTCG TGATGCGCGC CAGGGGGATC AGCCTGCCGC CGTGGCGCCG CGTGCTGGCG
CTGGCGGCGA TGGGCGGCAT CGGTTATGTC AGCCAGTCGT ATTGTTTTTT CACGGCGTTG
AACTACGCGC AGGCCAGCCT GGTGGCGCTG CTGCTGTATC TCTATCCGCT GTTCGTGACG
ATCCTGGCCG CCGTCTTCCT GAAGGAGCAT CTGACCACTT CCACGGTGAT CGCACTGGTG
CTCTGCTCGG TGGGCGCGGG TTTGACCGTA GGTGGCGGCG AGGGCAGTTC GCTCGGCATC
GCCCTTGGGG TGGCCGCGGC GGTGATCTAT TCGATCTATA TCGTGGTGGG CGCGCGCGTG
ACGGCAGGCG TCAATGCCAT TGCCACGACC ACGGTGATCT GTACGGCGGC GGCACTGGTC
TATGTGACGC TTGGGCTCTT GCGCGCGGGA GCCGGCGTGC CGCCGCAATT TCCGGCCAGT
GCAGGCGGCT GGCTGGCGTT GGTGGCCATC GCGCTGGTAT CGACCGTGCT CGCGATCCTG
ACGTTCTTCG CCGGACTGCA GCGGCTCGGT GCCTCCAAGG CATCGATGCT GTCGACGCTG
GAGCCTGTGG TGACCGTAGT GCTGGCCGCC GTGCTGCTCG GCGAACACAT CGGCCCGACG
CAGGCCGTCG GGGGCGGGTT GATCCTCGCG GGAGTGCTCT GGCTGACACG CCGGGCCAGC
GGTACGCCCC CACTGAAGGG TTCCGACGAA CGGAATTGA
|
|---|
| Protein sequence | MTASATGTLG HARDKLAGVL LIALSASAFG AMAIFARFAY AAGADVYGLL AVRFLLAAIA
MGFVMRARGI SLPPWRRVLA LAAMGGIGYV SQSYCFFTAL NYAQASLVAL LLYLYPLFVT
ILAAVFLKEH LTTSTVIALV LCSVGAGLTV GGGEGSSLGI ALGVAAAVIY SIYIVVGARV
TAGVNAIATT TVICTAAALV YVTLGLLRAG AGVPPQFPAS AGGWLALVAI ALVSTVLAIL
TFFAGLQRLG ASKASMLSTL EPVVTVVLAA VLLGEHIGPT QAVGGGLILA GVLWLTRRAS
GTPPLKGSDE RN
|
|---|
| |