Gene Rmet_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1001 
SymbolhemH 
ID4037798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1093215 
End bp1094330 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content64% 
IMG OID637976382 
Productferrochelatase 
Protein accessionYP_583156 
Protein GI94309946 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.535203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTT CGCCTGAACC GGCACACCAG CACGGCCAGC CGCCGCGCAC CGCGATCCTG 
CTGATCAACC TCGGCACCCC GGACGCGCCC ACGCCTAAGG CGGTGGGGCG CTACCTGAAG
GCGTTCCTGT CCGACCCGCG CGTGGTAGAG ATCCCGCGCC TGGCCTGGCT GCCGATCCTG
CACGGCCTGA TCCTGCCGTT CCGCTCGCGG GCGTCGGCCA TGAAGTACGA GTCGATCTGG
CTGCGCGAGG CGCATATGAC CGGGTCGCCG CTACTTGTGT ATACAGAGCG CCAAGCTCAT
GCGCTGCAAC TGTTGATGCA GCAGCAGGGT CACGACGTAA CGGTGGCCTG TGCGATGCGC
TATGGCAATC CGTCGATCGA ATCGGTCATG GAAGCGCTGC GCCGGCAGGG TACCGAACAG
ATCCTGTTGC TGCCGCTGTA TCCGCAGTTC TCCGGCACGA CCACGGCCAC CGCTTTCGAC
GAGGCATTTC GTGTCCTGTC GACATGGCGC AACCAGCCCG AGTTACGGCT GGTCAAGCAT
TTCCACGATC ACCCGGCGTA TATCTCTGCG CTGCACAAGC AGGTGGGCGG CTATTGGGCC
CAGCATGGCA AGCCGGACTT CGCGCGCGGT GACAAGCTGA TTCTGTCGTT CCACGGCCTT
CCGCGCCGGT TGCTGGACCT GGGTGATCCC TATCACTGCG AGTGTCTGAA GACCGGTCGT
CTGCTCGGCG AGGCGCTGGG CTTGCAGCCC GGCCAGTTTC AGGTGACGTT TCAGTCTCGC
TTTGGCAAGG CGGAGTGGTT ACAGCCCTAC ACGGCGCCGA CGCTGGCCGA ACTGGGCAAG
GTCGGGACAC AGCGCGTGGA CGTGTTCTGT CCCGGCTTTC CGGCCGACTG CATCGAGACG
CTCGAGGAGA TCGCGATGGA GGGGCAGTCG GAATTCCGCT TGGCCGGCGG CCAGGATTTC
CATTTCATCC CGTGCCTCAA CGATGCCGAG GCGTGGATCG CCGGATTGGC GGATATTGCA
TTGCAGCATT TGCAGGGGTG GCCGCTCAAT GTTCCACATC CCCACGAACT GGAAGCGAGA
CGCTCCCGCG CGCAGGCGCG TGGCGCGGGA GCCTGA
 
Protein sequence
MTFSPEPAHQ HGQPPRTAIL LINLGTPDAP TPKAVGRYLK AFLSDPRVVE IPRLAWLPIL 
HGLILPFRSR ASAMKYESIW LREAHMTGSP LLVYTERQAH ALQLLMQQQG HDVTVACAMR
YGNPSIESVM EALRRQGTEQ ILLLPLYPQF SGTTTATAFD EAFRVLSTWR NQPELRLVKH
FHDHPAYISA LHKQVGGYWA QHGKPDFARG DKLILSFHGL PRRLLDLGDP YHCECLKTGR
LLGEALGLQP GQFQVTFQSR FGKAEWLQPY TAPTLAELGK VGTQRVDVFC PGFPADCIET
LEEIAMEGQS EFRLAGGQDF HFIPCLNDAE AWIAGLADIA LQHLQGWPLN VPHPHELEAR
RSRAQARGAG A