| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1000 |
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| Symbol | hrcA |
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| ID | 4037797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1092058 |
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| End bp | 1093104 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637976381 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_583155 |
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| Protein GI | 94309945 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.897322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.518947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAC GTTCAAAAAA GCTTCTCAAG ACCCTGATCG AGCGATACAT CGTCGAGGGG
CAGCCCGTGG GCTCGCGCAC CCTGTCGAAG TTCTCGGGGC TTGATCTCTC GCCGGCCACC
ATCCGCAACG TGATGTCGGA CCTCGAGGAG ATGGGTTTCA TCGCCAGCCC ACATACCTCG
GCTGGCCGAA TCCCCACGCC GCGCGGGTAC CGGCTGTTTG TCGACACGAT GCTGACGGCG
CGCCCGCTGG AGCGCGCGCC GGAGTTCAGT GCCGAGTTGG CGGAGCTGAC CGGCCAGATC
CAGGGGCAAC TGGGTGGCCA GCAGTTCGGG CCGCAGCGCA TGATCACGGC GGCAGCGCAT
ACGCTTTCGA ATCTTTCTCA TTTCGCTGGC GTGGTGATGA CGCCACGGCG CGCGCAGTCG
TTCCGTCAGG TGGAATTCAT GCGGTTGTCT GACAAGCGCA TCCTGCTGAT CATCGTCAGC
CCGGAAGGGG ATGTGCAGAA CCGCATCATC CAGACCGACC TGGCGTACAC GCCGGGCCAG
CTCATCGAGG CGGCGAACTT CTTCAACTCG CACTATGCGG GCATGAGCTT CGACGCCGTG
CGCGACCACC TGCGCGTGGA GTTGCAGGAC CTGCGCCGCG ACATGTCCGC GCTGATGCAG
GCGGCGGTCG AGGCGGGCAG CAGCGCAATG GCCGAGGACA ACGAGCAGGT GTTCATTTCA
GGCGAGCGCA AGCTGCTGGA AGTGGAAGAC CTGTCATCGA GCATGGACAA GCTGCGTCGC
CTGTTCGACG TGTTCGAGCA CAAGACGAGC CTGCTGCAGC TGCTCGATGT GTCGAGTCAC
GCGCAAGGCG TGCAGATCTT CATCGGCGGC GAAAGCCAGC TTGTGCCGAT CGAGGACATG
GCCGTGATCA CCGCGCCATA CGGGGTGGAT GGCCAGATCG TTGGCACCCT GGGCGTGATC
GGCCCCACGC GGATGGCCTA CGAACGGGTG ATCCCGATCG TCGATATCAC CGCGCGGCTC
CTGTCCAGCG CGCTCAGCCA GAGCTGA
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| Protein sequence | MDERSKKLLK TLIERYIVEG QPVGSRTLSK FSGLDLSPAT IRNVMSDLEE MGFIASPHTS
AGRIPTPRGY RLFVDTMLTA RPLERAPEFS AELAELTGQI QGQLGGQQFG PQRMITAAAH
TLSNLSHFAG VVMTPRRAQS FRQVEFMRLS DKRILLIIVS PEGDVQNRII QTDLAYTPGQ
LIEAANFFNS HYAGMSFDAV RDHLRVELQD LRRDMSALMQ AAVEAGSSAM AEDNEQVFIS
GERKLLEVED LSSSMDKLRR LFDVFEHKTS LLQLLDVSSH AQGVQIFIGG ESQLVPIEDM
AVITAPYGVD GQIVGTLGVI GPTRMAYERV IPIVDITARL LSSALSQS
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