Gene Rmet_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0998 
Symbol 
ID4037795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1089190 
End bp1090959 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content69% 
IMG OID637976379 
ProductDNA repair protein RecN 
Protein accessionYP_583153 
Protein GI94309943 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.553113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCA GCCTCTCGAT CCGCGACTTC GTCATCGTCG ACACGCTCGA CCTCGACTTC 
TCCGCCGGCT TTACCGTCTT CACGGGTGAA ACCGGCGCGG GCAAGTCGAT CCTCATCGAC
GCGCTCGCCC TGGTGTTAGG TGAACGGGCC GACGCAGGCG TGGTCCGCGA AGGCGCGGCA
CGTGCCAGCA TCAGTGCCAC CTTCCACACC CACTCAGCGC TGGATGCGTG GCTGGCCGAG
CGCGAACTGT CGAGCGACAT GGAAGACGAC GACGGCGGCA CCGTGCTGCT GCGCCGGACT
GTCGACGCCA GCGGCCGCAG CAAGGCCTTC ATCAATGGCG CCGCGGCAAC GCTGGCGCAG
TTGCGCGAGG TGGGCGACCA GCTCGTCGAT ATCCACGGCC AGCACGCGCA CCAGTTGCTG
CTGCGCCCGG ATGCTCAGCG CCAGTTGTTC GACGCCCACG CAGGTCTGAC CGAACAATCC
GCCGCCGTGG CCGAGGCCTG GCGTGTGTGG CGCGCCTGCG TCAAGCAGCG CGAGGCGGTC
GAGCACCAGT CGCGCGAGAT GCAACTCGAG CGGGAGCGGC TCGAATGGCA GGTTGGCGAG
CTGGACAAGC TCGCGCCGCA GCCGGGCGAA TGGGAAGAGA TCCAGGGCGA ATACAACCGC
CTGTCACACG CGGCGGGCCT GATCGACGGC AGCCGCGCCG CGCTCGACGC GCTATCCGAA
TCGGACGGCG CAGTGACCTC CGTGCTCAAC GGCGTGGTGC ACCGGCTCCA GCAACTGGCC
GATGTCGACC CGGGCCTGCG CGACGTGCTG GCCGCGCTCG AGCCGGCGCT GGTGCAGGTC
GAGGAAGCCG CGCACTCCCT GAACCGCTAT GTCGACCGGC TCGAACTCGA TCCAGAACGG
CTGCAGGCCG TGGAAGAGCG CATGCAGGCG CTGCACGCCA CCGCCCGCAA GTATCGTCTG
CCGCCGGAAC AGCTATCCGA CGAGTTGCTG GCCCGCCGCC AGCAACTTGA CGACCTCCAG
GCCGCCCAGG ACATCAACAA GGTGCTGGCG CGCGAAGCCG CGTCGCGCGC TGCCTACCTG
ACCCTCGCCC AGCATCTGTC GGGCGCGCGC AAGGTGGCAG CCGAAGCCTT GTCCGCCGCG
GTTACCAATG CGATGCAGGG CCTGTCGATG GCCGGTGGCA CGTTCGCCGT GGCATTGCAT
CCGCTCGAGG AAGGCCAGAG CCACGGGCTC GAGCAGATCG AGTTCCTGGT GGCAGGCCAT
GCCGGCGTGA GCCCCAGGCC GCTCGCCCGC GTGGCATCGG GTGGCGAACT GGCGCGGATC
AGCCTGGCGA TTTCGGTCAT CACGAGCGAG GCGGCGCCCA CGCCAACGCT GATCTTCGAC
GAAGTGGATA CGGGGATCGG CGGCGCGGTG GCCGAAGTGG TTGGACGCCG CCTGCAGGAA
CTCGGACGTT CACGGCAGGT ACTCTGCGTC ACGCACCTGC CACAGGTGGC GGCGCAGGCC
GGGACCCACC TGCTGGTCAG CAAGGAAACC AGCAAGGACG ACAGAAAGGC CGGAGGCGAC
AATGGCGGAC CGGTGACGCG GTCGCGCATC CGGACACTCG ATACGGATGG CCGCGTCCAG
GAAACCGCGC GTATGCTTGG TGGTACCACG GTCACTGCCA CGACCATGCA ACATGCCGAG
GAAATGCTGG CGCAAGGCAC CAAGGCAGCC CAAGCGGCCA ACTCGCCGCG CGAAGCCAGT
GGCAAGCGCC CGCGCCGCGC GGCCGGCTGA
 
Protein sequence
MLRSLSIRDF VIVDTLDLDF SAGFTVFTGE TGAGKSILID ALALVLGERA DAGVVREGAA 
RASISATFHT HSALDAWLAE RELSSDMEDD DGGTVLLRRT VDASGRSKAF INGAAATLAQ
LREVGDQLVD IHGQHAHQLL LRPDAQRQLF DAHAGLTEQS AAVAEAWRVW RACVKQREAV
EHQSREMQLE RERLEWQVGE LDKLAPQPGE WEEIQGEYNR LSHAAGLIDG SRAALDALSE
SDGAVTSVLN GVVHRLQQLA DVDPGLRDVL AALEPALVQV EEAAHSLNRY VDRLELDPER
LQAVEERMQA LHATARKYRL PPEQLSDELL ARRQQLDDLQ AAQDINKVLA REAASRAAYL
TLAQHLSGAR KVAAEALSAA VTNAMQGLSM AGGTFAVALH PLEEGQSHGL EQIEFLVAGH
AGVSPRPLAR VASGGELARI SLAISVITSE AAPTPTLIFD EVDTGIGGAV AEVVGRRLQE
LGRSRQVLCV THLPQVAAQA GTHLLVSKET SKDDRKAGGD NGGPVTRSRI RTLDTDGRVQ
ETARMLGGTT VTATTMQHAE EMLAQGTKAA QAANSPREAS GKRPRRAAG