Gene Rmet_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0979 
Symbol 
ID4037776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1064604 
End bp1065746 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content65% 
IMG OID637976360 
Productpeptidase M14, carboxypeptidase A 
Protein accessionYP_583134 
Protein GI94309924 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.268801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0514044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAG CGCTGCATAT CTCCACGCTG TTCGACTCGG GTGCGATCGA AGTCGAAGCC 
CTCGATCGTG CCGACGACAT CCGCCTGCGT ATCCGCGCCG ATTCGCACGC CGACTTTCGC
CAGTGGTTCC ACTTCCGGCT GCAGGGCGCG GCCGGGCAGG ACTGCAAACT CCAGTTTCTG
AACGCGGGCG AATGCACCTA CCCGGACGGC TGGCGCGACT ACAGCGTCGT GGCCTCCTAT
GACCGGGCCC ACTGGTTCCG CGTGCCGACG CGCTACGACG GCACCACCAT GACCGTCGAC
TTCAAGCCTG AACACGACAG CGTCTGGTTC GCGTATTTCG AACCGTATCC CGAGGAGCGG
CACCTTTCGC TGCTGGCCTC CTGCCAGCGT TCGCCGCTGG CGAAGCTGTC GCACCTTGGC
AGCACCGTCG ATGGGCGCGA CCTGACCTGC GTGACGCTGG GTCAGCCAGG GCCGGGCAAG
AAGACGGTCT GGATGATCGC GCGCCAGCAT CCGGGCGAAA GCATGGCCGA GTGGTTCTGC
GAAGGCGTGC TGCAGCGCCT GACGGGCACC GGCATGTGGG CGGGTGATCC TGTGGCGCGC
AAGCTGCTCG ATCGCGCCGT GTTCCATATC GTGCCGAACA TGAATCCGGA TGGTTCGGCG
CGCGGCAACC TGCGCACGAA TGCCGCGGGC GCCAACCTCA ATCGCGAATG GATGCAGCCG
AGCCTCGAGA CGAGCCCCGA GGTGTACCAC GTGCGCCGGG CGATCGAAGC CACTGGTGTC
GATCTGTTCT TCGACATTCA TGGTGACGAG GCGCTGCCGT ACAACTTCGT AGCCGGCAGC
GAGATGCTTC CTGGCTTTAC CGCAGCCCAG CGCGACCAGC AGTCGCGCTT CATCGAGGCG
TTCAAGCGGG CCACGCCCGA CTTCCAGGAC GTGCACGGCT ACGCTGCAAG CAAGTACAAC
GCGGACGCAC TGAAGCTTGC CTCGAAGTAC ATCGGCCATA CCTTCGGCTG CCTGGCCCTG
ACGCTGGAGA TGCCGTTCAA GGACAACGCC GACCTGCCAG ACCCGGTGCT GGGCTGGAAC
GGTGCGAAGA GCGGCCTGCT TGGTACGTCG ATGCTGCAGG CGGTGCTGGA GTATCTGGGC
TGA
 
Protein sequence
MTSALHISTL FDSGAIEVEA LDRADDIRLR IRADSHADFR QWFHFRLQGA AGQDCKLQFL 
NAGECTYPDG WRDYSVVASY DRAHWFRVPT RYDGTTMTVD FKPEHDSVWF AYFEPYPEER
HLSLLASCQR SPLAKLSHLG STVDGRDLTC VTLGQPGPGK KTVWMIARQH PGESMAEWFC
EGVLQRLTGT GMWAGDPVAR KLLDRAVFHI VPNMNPDGSA RGNLRTNAAG ANLNREWMQP
SLETSPEVYH VRRAIEATGV DLFFDIHGDE ALPYNFVAGS EMLPGFTAAQ RDQQSRFIEA
FKRATPDFQD VHGYAASKYN ADALKLASKY IGHTFGCLAL TLEMPFKDNA DLPDPVLGWN
GAKSGLLGTS MLQAVLEYLG