Gene Rmet_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0977 
Symbol 
ID4037774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1063220 
End bp1063759 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content69% 
IMG OID637976358 
Producthypothetical protein 
Protein accessionYP_583132 
Protein GI94309922 
COG category[R] General function prediction only 
COG ID[COG1569] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID[TIGR00305] probable toxin-antitoxin system toxin component, PIN family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0437908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCA CCCACACCGG CCACGATGCC AACTCCAGCG CCGGCCCTGA TGCCGGCGCC 
CTCTCCGTCA CTTCCGCACC CCGGGTAGTC CTCGACTCCA ATATCTGGGT AGACCTGCTG
GTCTTCCGCG ACCCGCATGT GGAACCGATC CGGGCCGCGC TGGCGGCCGG CGCCATCGCA
CCGGTGATCC GCGCCGACTG CCGCGAGGAG CTGCGCCGGG TGCTGGCCTA TCCCCAGTTC
ACCCGCTTTG CCGTCGATAT CGACGCGGCG CTCGCGGAGG TCGACCGCTT CACCACGTTA
GAACCGGTGC CCACCCAGGA AGACGCTGAC GCGATCCGCC TGCCCAAGTG CAAGGACACC
GACGACCAGA AGTTCATCGA ACTCGCCCAT TTCTCGCGCG CGGCGCTGCT GGTGTCCAAG
GACAAGGCAG TGCTCAAGCT CCGCAGCCGC CTGCGCCGCT CCAGCGGGGT GGAAGTGCTG
CCGCCGCTGG CATTCGGCGG CTGGCTGGCG GCATGGGTGC CGCCCGATGA TCGCGGCTAG
 
Protein sequence
MHTTHTGHDA NSSAGPDAGA LSVTSAPRVV LDSNIWVDLL VFRDPHVEPI RAALAAGAIA 
PVIRADCREE LRRVLAYPQF TRFAVDIDAA LAEVDRFTTL EPVPTQEDAD AIRLPKCKDT
DDQKFIELAH FSRAALLVSK DKAVLKLRSR LRRSSGVEVL PPLAFGGWLA AWVPPDDRG