Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0977 |
Symbol | |
ID | 4037774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1063220 |
End bp | 1063759 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637976358 |
Product | hypothetical protein |
Protein accession | YP_583132 |
Protein GI | 94309922 |
COG category | [R] General function prediction only |
COG ID | [COG1569] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | [TIGR00305] probable toxin-antitoxin system toxin component, PIN family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0437908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACACCA CCCACACCGG CCACGATGCC AACTCCAGCG CCGGCCCTGA TGCCGGCGCC CTCTCCGTCA CTTCCGCACC CCGGGTAGTC CTCGACTCCA ATATCTGGGT AGACCTGCTG GTCTTCCGCG ACCCGCATGT GGAACCGATC CGGGCCGCGC TGGCGGCCGG CGCCATCGCA CCGGTGATCC GCGCCGACTG CCGCGAGGAG CTGCGCCGGG TGCTGGCCTA TCCCCAGTTC ACCCGCTTTG CCGTCGATAT CGACGCGGCG CTCGCGGAGG TCGACCGCTT CACCACGTTA GAACCGGTGC CCACCCAGGA AGACGCTGAC GCGATCCGCC TGCCCAAGTG CAAGGACACC GACGACCAGA AGTTCATCGA ACTCGCCCAT TTCTCGCGCG CGGCGCTGCT GGTGTCCAAG GACAAGGCAG TGCTCAAGCT CCGCAGCCGC CTGCGCCGCT CCAGCGGGGT GGAAGTGCTG CCGCCGCTGG CATTCGGCGG CTGGCTGGCG GCATGGGTGC CGCCCGATGA TCGCGGCTAG
|
Protein sequence | MHTTHTGHDA NSSAGPDAGA LSVTSAPRVV LDSNIWVDLL VFRDPHVEPI RAALAAGAIA PVIRADCREE LRRVLAYPQF TRFAVDIDAA LAEVDRFTTL EPVPTQEDAD AIRLPKCKDT DDQKFIELAH FSRAALLVSK DKAVLKLRSR LRRSSGVEVL PPLAFGGWLA AWVPPDDRG
|
| |