Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0969 |
Symbol | |
ID | 4037766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1053204 |
End bp | 1054145 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637976350 |
Product | LysR family transcriptional regulator |
Protein accession | YP_583124 |
Protein GI | 94309914 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.233069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0392284 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTCA GCCGGATCGA TCTCAATCTC TTCGTAGTAT TCGACGCCAT CTACAGCGAG GGGAGCATCA CCGCTGCCGC GCGCCAGTTG AACCTGACGC AGCCGGCCGT GAGCCACGCG CTGGGCCGGC TGCGCACGCT GTTCGACGAT CCGCTGTTCG AGCGCCGGGG GCAGGGCATG GCGCCGACGC CGCTGGCCCG TTCGTTGGCC GGGGAGGTGC GTGGGGCGTT GCAGTCCTTC GCCCGGACGC TGCAGGACAC GCCGCACTTC GACCCCACCA ACACCACGCG CCGGTTCACC ATCGGCATGC GCGACGCGCT CGAGTCCACG CTGCTGCCGC CGCTGATGGC GCGCGTGACC GCGATGGCGC CGCACGTGGA GATTGCGGCG ATTCGCTTCG ACCGGCGCGA GATGGAGTCC GAGCTGCTGG CCGGCACGCT GGACGCCGCG ATCGACATCC TGCTGCCGGT ATCGCCGGCG ATCCATCACG CCGCGTTCAT GTCCGATCCG ATGGTGGTGC TGGCGCGGCG CGATCATCCG CTGGTCAAGA AGGAGCTGAC GCTCGAGCGC TATCTCGCGG CCGAGCACGT GCACGTGTCC TCGCGGCGGC GAGGCGCGGG GCTGGAGGAC CAGGCGCTGC ATCGCATGGG CCTGACGCGG CGGGTGCGCC TGCGTTGCCA GCACTATGCA GCCGCGTGCC GGGTGGTCAG TTGCACCGAT CTGCTGGCCA CGCTGCCGCT GCGCTACGCG CGCATCGCCA ACGAGCCCTA TGCCAACCGC CTGCTGTCGC TGCCGTTCAA GGTGCCGTCG CTCGAACTGC ATCTGTACTG GCACGCGGGC GGCGAGAACG ACGGCGCGAA CCGCTGGCTG CGCGAGCAGC TGATGACGGT GATGGAATCG CTCGGCAGTG GCATGACGGA TGTCACGTCG GCTGCCGAGT AA
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Protein sequence | MQLSRIDLNL FVVFDAIYSE GSITAAARQL NLTQPAVSHA LGRLRTLFDD PLFERRGQGM APTPLARSLA GEVRGALQSF ARTLQDTPHF DPTNTTRRFT IGMRDALEST LLPPLMARVT AMAPHVEIAA IRFDRREMES ELLAGTLDAA IDILLPVSPA IHHAAFMSDP MVVLARRDHP LVKKELTLER YLAAEHVHVS SRRRGAGLED QALHRMGLTR RVRLRCQHYA AACRVVSCTD LLATLPLRYA RIANEPYANR LLSLPFKVPS LELHLYWHAG GENDGANRWL REQLMTVMES LGSGMTDVTS AAE
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