Gene Rmet_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0963 
Symbol 
ID4037760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1048074 
End bp1048766 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content66% 
IMG OID637976344 
Producturease accessory protein UreF 
Protein accessionYP_583118 
Protein GI94309908 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0374203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC TCCCCCAGCT CATCTCCCTG CTGCACCTTG CCTCGCCGGC GCTCCCCATC 
GGCGGCTTCA GCTATTCGCA GGGACTGGAG GCGGCCATCG ATTGCGAGTT GGTGCGGGAT
GCGACGACTG CCGAACGCTG GATTCGCGAC AACCTCCTGC ATGTGCAGGC CCAATGCGAG
GCGCCTGTCT GGCTACTGCT GCATCGCGCG TGGCAGACGC AGGACCACGC CTCCGTGCGG
CAATGGAACG ACTGGTTTCA TGCCACCCGG GAAACATCCG AACTGCGGCT CGAGACCGAG
CAGATGGGCT GGTCGCTGGC GAAACTGATC GCGCAGATGG GTTGGGGCGA CGATGCGTCC
CGCGACCTGC TGCGCGACAT GCGACCGGTC TGCCTGCCCA CGGCGTTTTC CTCGGCCTGC
GTGGCGCTAG GTATCGCTGC GCGTGAAGGC TTGGCCGCGT ATCTCTTCAA CTGGGCCGAA
AACCAGGTGG CAGCCGCCAT CAAGGCGGTG CCGCTCGGCC AGGTGGCGGG CCAGCAGATG
CTGCTTGGCT TGCATCAGGC GGTGCTCGGC ACCGTCGATG AAGCAGTGTG CCGCGCCGAT
GCGGTGCCAC CATTGCTTTC CACGTTCTCC CCGATGCTAG GCGTACTGTC GGCGCGTCAC
GAGACGCAGT ACTCCCGGCT GTTCCGATCC TGA
 
Protein sequence
MTALPQLISL LHLASPALPI GGFSYSQGLE AAIDCELVRD ATTAERWIRD NLLHVQAQCE 
APVWLLLHRA WQTQDHASVR QWNDWFHATR ETSELRLETE QMGWSLAKLI AQMGWGDDAS
RDLLRDMRPV CLPTAFSSAC VALGIAAREG LAAYLFNWAE NQVAAAIKAV PLGQVAGQQM
LLGLHQAVLG TVDEAVCRAD AVPPLLSTFS PMLGVLSARH ETQYSRLFRS