Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0961 |
Symbol | ureC |
ID | 4037758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1045698 |
End bp | 1047416 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637976342 |
Product | urease subunit alpha |
Protein accession | YP_583116 |
Protein GI | 94309906 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0940233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGA AGATCTCCAG GCAGGCCTAT GCCGAGATGT TCGGCCCGAC CACGGGCGAC AGGTTGCGTC TTGCCGACAC GGACCTTGTG ATCGAAGTCG AGCGCGATTT CACGATCTAC GGCGAGGAAG TGAAGTTCGG CGGCGGCAAG GTGATTCGCG ATGGCATGGG CCAGAGCCAG CGCATGTCGA AGGACTGCGT CGACACGGTG GTCACCAACG CACTGATCAT CGACCACTGG GGCATCGTGA AGGCCGATAT CGGGCTGAAG CACGGGCGCA TCGCGGCAAT CGGCAAGGCG GGTAATCCGG ATATCCAGCC GGGGGTGACG ATCATCGTCG GGCCGGGTAC CGAGGTCATC GCGGGCGAGG GGATGATTGT CACCGCTGGC GGCATCGACA CGCACATCCA CTTCATCTGC CCGCAGCAGA TCGAAGAAGC GCTGATGAGC GGCGTGACGA CGATGATCGG CGGCGGCACC GGGCCGGCGA CGGGCACCTA TGCGACGACC GTGACGCCGG GCCCGTGGTA CATGGAGCGG ATGCTGCAGG CGGCCGATGC GTATCCGATG AACATCGGCT TTCTCGGCAA GGGCAACGCC AGCCTGGCGG CGCCGCTGAC CGAGCAGGTG GAGGCGGGCG CCATCGGCTT GAAGCTGCAC GAGGACTGGG GCACCACGCC GCAGGCGATC GACACCTGCC TGTCCGTGGC CGATGCCACC GATACCCAAG TGGCGATCCA CACCGATACG CTCAACGAAG GCGGTTTTGT CGAGGCGACG ATTGCCGCGT TCAAGGGCCG CACGATCCAT ACGTATCACA CCGAGGGCGC GGGTGGCGGC CACGCGCCGG ACATCATCAA GGTTTGCGGC GAGGCTAATG TGCTGCCGTC GTCGACCAAT CCGACGCGCC CGTACACCGT GAACACGCTG GACGAGCACC TGGACATGTT GATGGTCTGC CATCACCTGG ATCCGGCCAT TGCGGAGGAC ATTGCGTTCG CCGAGTCGCG CATCCGTCGC GAGACCATCG CGGCCGAGGA CATCCTGCAT GACCTGGGCG CGTTCTCGAT GATCTCGAGC GATTCGCAGG CCATGGGCCG CGTGGGCGAG GTGATCATTC GCACGTGGCA GACCGCGCAC AAGATGGCCG CGCAGCGCGG CAAGTTGCCC GGCGATCCAC ACGATGCGCG TGGCGGGCAC GACAACTTCC GCGTCAAGCG CTATATCGCC AAGTACACGA TCAATCCAGC GCTCACGCAC GGTATCGCGC ACGAGGTGGG GTCGATCGAA GTCGGCAAGT GGGCGGATCT GGTGTTCTGG AAGCCGGCCT TCTTCGGCGT GAAGCCGAGC CTGATTCTCA AGGGCGGCAT GATCGCGGCG GCGGCGATGG GCGATCCGAA TGCCTCGATC CCGACACCGC AGCCGGTGCA CTATCGTCCG ATGTTCGCTT CGGCCGGCGG GGCGCTGCCG AGATCGTCGC TCACCTTCGT CTCGCAGGCG GCGCTGGCGG CGAATGTCGG CGAGCGCTAT GGCCTGGCCA AGACGCTCAC CGCAGTGCGC GGCACGCGTA CCGTCAGCAA ACGCGACATG GTGCACAATG ACTGGCAGCC GCACGTCACC GTGGATCCGG AGACTTACCA GGTGGTAGCC GATGGTCAGC TGCTGACGTG CGAACCTGCC ACTGTGCTGC CGATGGCGCA GCGCTATTTC CTGTTCTGA
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Protein sequence | MSVKISRQAY AEMFGPTTGD RLRLADTDLV IEVERDFTIY GEEVKFGGGK VIRDGMGQSQ RMSKDCVDTV VTNALIIDHW GIVKADIGLK HGRIAAIGKA GNPDIQPGVT IIVGPGTEVI AGEGMIVTAG GIDTHIHFIC PQQIEEALMS GVTTMIGGGT GPATGTYATT VTPGPWYMER MLQAADAYPM NIGFLGKGNA SLAAPLTEQV EAGAIGLKLH EDWGTTPQAI DTCLSVADAT DTQVAIHTDT LNEGGFVEAT IAAFKGRTIH TYHTEGAGGG HAPDIIKVCG EANVLPSSTN PTRPYTVNTL DEHLDMLMVC HHLDPAIAED IAFAESRIRR ETIAAEDILH DLGAFSMISS DSQAMGRVGE VIIRTWQTAH KMAAQRGKLP GDPHDARGGH DNFRVKRYIA KYTINPALTH GIAHEVGSIE VGKWADLVFW KPAFFGVKPS LILKGGMIAA AAMGDPNASI PTPQPVHYRP MFASAGGALP RSSLTFVSQA ALAANVGERY GLAKTLTAVR GTRTVSKRDM VHNDWQPHVT VDPETYQVVA DGQLLTCEPA TVLPMAQRYF LF
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