| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0954 |
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| Symbol | |
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| ID | 4037751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1040620 |
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| End bp | 1041822 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637976335 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_583109 |
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| Protein GI | 94309899 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.449226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.150599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCT TTTCCTCGAA ATCCGGCAAG TCATTCACGC TATCCGTGCC GGAACGCCAG
CCGCTGTTCT CCACGCGCAT GTGGATGGCG ATGGCGGTAC TGACCGTGGT CGTGGCGATC
GGCGTGCCAG TCTGCGCGCT GGTCGTGCCG GAAGGCCACG CGCTGCATCT GTCGGCCTAT
GCCTTGACGT TGATCGGCAA GATCATGTGC TTCGCGCTGG CGGCCATTGC GCTCGATCTG
GTGTGGGGCT ATTGCGGCAT CCTGAGCCTC GGCCATGGTC TGTTCTTCGC GCTGGGCGGG
TATGCGATGG GCATGTACCT GATGCGGTCG ATCGGTCGCG ATGGTGTCTA CAAGAGCGAT
CTGCCCGACT TCATGGTGTT CCTGGACTGG AAGGAGCTGC CGTGGTTCTG GCATGGCACC
GAGCACTTTC CCTACGCATT GCTGCTGGTG GTACTGGTGC CGGGCGTGCT GGCGTGGCTG
TTTGGCTTCT TCGCGTTCCG GTCCCGCATC AAGGGTGTGT ACCTGTCGAT CATCACGCAG
GCTATGACGT ACGCCGCGAT GCTGCTGTTC TTCCGCAATG AAACGGGCTT CGGCGGCAAT
AACGGCTTTA CCGACTTCAA GCGCATCGCC GGTTTTGCCG TGGCTGCGCC GCAGACGCGT
GCCGCGCTGT TCGTGCTGAC GTTCCTTGCA CTGCTGGCCG GATTCGTGGC CTGCCGCTAC
ATCGTCACGT CCAAGCTCGG CCGGGTGGTG ACCGCCGTGC GCGACGCGGA GATGCGCGTG
ATGTTTTCGG GCTACAACCC GCTCGGGTAC AAGCTGTTCG TGTGGACGTT CTCGGCTGTG
CTTTGCGGCA TTGCCGGAGC GCTGTACGTG CCGCAGGTCG GCATCATCAA CCCGAGCGAG
ATGTCGCCCG CGAACTCGAT CGAAATGGCG GTGTGGGTCG CCGTCGGCGG GCGCGGCACG
CTGATCGGGC CGGTAGTGGG GGCATTCCTG GTCAACGGCG CGAAGACGAT GTTCACGGCC
TACTTCGCGG AGTACTGGCT ATTCCTGCTC GGCGCGATGT TCGTGCTGGT GACGCTGTAC
CTGCCAGATG GCGTGGTGGG CCTCTGGCGA CGCCTGCGTG ATCGGCGCAC TTCGAAGGTA
GAAACCGGAG CCGCCGATGA AGCGGAAGCC GTGGTGGCGT CGCAGCAAGG GAGCAAGGCA
TGA
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| Protein sequence | MSSFSSKSGK SFTLSVPERQ PLFSTRMWMA MAVLTVVVAI GVPVCALVVP EGHALHLSAY
ALTLIGKIMC FALAAIALDL VWGYCGILSL GHGLFFALGG YAMGMYLMRS IGRDGVYKSD
LPDFMVFLDW KELPWFWHGT EHFPYALLLV VLVPGVLAWL FGFFAFRSRI KGVYLSIITQ
AMTYAAMLLF FRNETGFGGN NGFTDFKRIA GFAVAAPQTR AALFVLTFLA LLAGFVACRY
IVTSKLGRVV TAVRDAEMRV MFSGYNPLGY KLFVWTFSAV LCGIAGALYV PQVGIINPSE
MSPANSIEMA VWVAVGGRGT LIGPVVGAFL VNGAKTMFTA YFAEYWLFLL GAMFVLVTLY
LPDGVVGLWR RLRDRRTSKV ETGAADEAEA VVASQQGSKA
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