| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0953 |
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| Symbol | |
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| ID | 4037750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1038981 |
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| End bp | 1040618 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976334 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_583108 |
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| Protein GI | 94309898 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.794484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.169998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCGAC CCAATATCCG TACATGGCTG CGTGTCATGC TCGCCGCGCT GCTGCTGGCC
GCGGCACCGT TGTGGGCCGC CACGCCGCTG ACGCAGGCCG ACCTCAAGCC ATTGGCCGAG
GATGACTACG ATGCCAAGAC CGCGGCGCTG AACAAGCTCA CTCAGGCGCC GGCGGAGCAG
GCCGGCCCGA TCCTGAAGGC CTTGCAGGAT GACGCGCTGC AGTACGCGCC CTCAGTCGGC
ATGGTGCGCC AGGATGGCGA CAAGACCGTC GACGCGGTCA CCGGCAAGCC GGTCATCGTG
AAGGCGGACG AGCTCGAATC GCTGACGCTG AATAACAGCC TGCGCGCCAT CGTCGATAGT
GCCGCGAGCA GCCTGGAGCT GCAGTCACCG GACATCGCGG TGCGCACGCA GGCCATCAGT
ACGCTGTTCG ATCAACCAGA GAACGCTTCG CGTGCGGCGG TGGAGGCCGC GCGCAAGGCC
GAGGCCGATG CCGGACTGCG GGCGAGGCTC GACGTGATCT GGGCCAACAC GGTTCTCGCG
CAAGGTGCCG AAGCGGGCCG GGACGCGCGT ATCGAGGCGA TTCGCATCCT CGGCCACGAC
AGCAATCCGC AATCGCGCCA GAAGCTGATG CCGCTGGTCG AGCGCGACGC GGCCGGCAAG
TACAAAGAGG CCGACGAAGG CGTGCGCGTG GCCGCGCAAG TGGCCATTGA CCAGTTGCGG
ACCGAACAGC GCCGCGCCGA ACTGCTCGGC AACCTGTTCG CGGGTCTGAG CCTTGGCAGC
GTGCTGCTGC TGGCGGCGCT GGGTCTGGCG ATCACGTATG GGCTGATCGG CGTCATCAAC
ATGGCGCACG GCGAGTTTCT GATGATCGGC GCCTATGCCA CCTACGTGGT GCAGACGCTG
TTTCGTGCCT GCGCGCCCAA TGCGTTCGAC TGGTACCTCG TGGCGGCCGT GCCTGCGTCC
TTCCTGGCTG CCGGAGCCGT CGGTTTCGCG CTCGAGCGAA TCGTGCTGCG CCATCTCTAT
GGCCGCCCGC TGGAGACGCT GCTGGCCACG TTCGGTGTCA GCCTGCTGAT GATGCAGGCC
GTGCGTACGA TCTTCGGCGC GCAGAACGTG GAAGTGGCCA ATCCCGCGTG GATGAGCGGC
GGCATCGAGG CACTCGCCGG GCTCGTGATT CCGTACAACC GCATCATCAT CATCCTGTTC
GCGCTGGGCG TGGTGACGGT GGCATGGGCC GTACTGAATC GCACGCGCCT GGGTCTGTTC
GTGCGCGCCA CGACGCAGAA CCGCACGATG GCGGCCTGCG TGGGCGTGCG GACGTGGAAG
GTGGACAGCT ACGCGTTCGC ATTTGGCGCC GGCATCGCGG GGCTCGGCGG TTGCGCGCTC
TCGCAGATCG GTAACGTGGG CCCGGACCTG GGGCAGGCCT ACATCATCGA CTCGTTCATG
GTGGTGGTGC TGGGTGGCGT CGGGCAGCTG GCGGGCACGA TCGTGGGCGC GTTCGGCCTC
GGCATCATCA ACAAATTCAT CGAGCCGTTC TATGGCGCGG TGCTGGCCAA GATCTTCGTC
CTCGTGCTGA TCGTGCTGTT CATCCAGAAG CGGCCACAAG GACTTTTCGC GCTCAAGGGG
CGCAGCGCGG AGGCCTGA
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| Protein sequence | MHRPNIRTWL RVMLAALLLA AAPLWAATPL TQADLKPLAE DDYDAKTAAL NKLTQAPAEQ
AGPILKALQD DALQYAPSVG MVRQDGDKTV DAVTGKPVIV KADELESLTL NNSLRAIVDS
AASSLELQSP DIAVRTQAIS TLFDQPENAS RAAVEAARKA EADAGLRARL DVIWANTVLA
QGAEAGRDAR IEAIRILGHD SNPQSRQKLM PLVERDAAGK YKEADEGVRV AAQVAIDQLR
TEQRRAELLG NLFAGLSLGS VLLLAALGLA ITYGLIGVIN MAHGEFLMIG AYATYVVQTL
FRACAPNAFD WYLVAAVPAS FLAAGAVGFA LERIVLRHLY GRPLETLLAT FGVSLLMMQA
VRTIFGAQNV EVANPAWMSG GIEALAGLVI PYNRIIIILF ALGVVTVAWA VLNRTRLGLF
VRATTQNRTM AACVGVRTWK VDSYAFAFGA GIAGLGGCAL SQIGNVGPDL GQAYIIDSFM
VVVLGGVGQL AGTIVGAFGL GIINKFIEPF YGAVLAKIFV LVLIVLFIQK RPQGLFALKG
RSAEA
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