Gene Rmet_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0948 
Symbol 
ID4037745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1033351 
End bp1034319 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content60% 
IMG OID637976329 
Productubiquinol oxidase, subunit II 
Protein accessionYP_583103 
Protein GI94309893 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR01433] cytochrome o ubiquinol oxidase subunit II 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC CGAAAATGCC GCCCCTGATG CGGTACCTGC CTTGCCTTGG CCTGCTCCTG 
TTGGCCGGCT GCGACTTCGC GCTGATGAAC CCGAAAGGGC AAGTCGGCGT CGACATCAAG
GGCATCATCC TGATCGCCAC CTGGCTGATG CTGCTGGTCG TCGTACCGGT CATCATCCTG
ACGCTCGTGT TTGCGTGGAA GTATCGCGCC AGCAACACGT CTGCTGAATA CGATCCGAAC
TGGTCGCACT CCACCCGCAT CGAAGTGGTG GTTTGGCTGA TCCCCTGCCT GATCATCATC
GCGCTGGGCA TCATCACCTG GAAGTCGTCG CACGATCTCG ACCCGTACAA GCCGCTCGAG
TCGAACGTCA AGCCGGTGAC CGTGGAAGCC GTGGCGATGA ACTGGAAATG GCTGTTCATC
TATCCGGAAC TGAAGATCGC GACGGTGAAC CAGCTCGCGC TGCCGGTGAA CACGCCGGTG
AACTTCAAGA TCACGTCGGA TTCGATCATG AATTCGTTCT TCATCCCGCA ACTGGGTAGC
CAGGTTTACG CCATGGCTGG GATGGAGACC AAGCTGCACC TCATCGCCAA TGAAGCCGGC
ACGTTTGACG GCATGTCCGC CAACTACAGC GGCGGCGGCT TCTCGGGCAT GAAGTTCAAG
GCCATCGCCA TGTCGAACTT CGAGTTCGAC AAGTGGGTGG AAAAGGTGCG CGCGTCCGAA
AAGCAGCTCG CGTCCGAGGA CTACAAGGTC CTGGCCAAGC CGAGCGAAGC GGAACCGGTG
ACGTACTTCG GCAAGGTCGA AGACGGTCTG TACACCGGCA TCCTGCATCA GTACATGGGC
GGCGACGGCC ATGCAATGGC CCGCGAAGGT TTTGATGGCG GTCCGGTCTG CACGTCGCGT
AACACGCTCG GTGAAGAGCG GGTGTCCATG GCCACGCCGG CCAAGCCGGC GCTGGGCGCG
CAAATCTAG
 
Protein sequence
MKKPKMPPLM RYLPCLGLLL LAGCDFALMN PKGQVGVDIK GIILIATWLM LLVVVPVIIL 
TLVFAWKYRA SNTSAEYDPN WSHSTRIEVV VWLIPCLIII ALGIITWKSS HDLDPYKPLE
SNVKPVTVEA VAMNWKWLFI YPELKIATVN QLALPVNTPV NFKITSDSIM NSFFIPQLGS
QVYAMAGMET KLHLIANEAG TFDGMSANYS GGGFSGMKFK AIAMSNFEFD KWVEKVRASE
KQLASEDYKV LAKPSEAEPV TYFGKVEDGL YTGILHQYMG GDGHAMAREG FDGGPVCTSR
NTLGEERVSM ATPAKPALGA QI