| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0920 |
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| Symbol | |
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| ID | 4037716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1005308 |
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| End bp | 1006561 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637976300 |
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| Product | putative transporter signal peptide protein |
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| Protein accession | YP_583075 |
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| Protein GI | 94309865 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCGTCT GGATGGCTGC TGCGCTGTTT TGCGCGGCGG CAGCAGCGCA GGCGCAGACT
GGCGCGCCAA TCCGCCTGGG CATGATCGAT GGCCTGTCCG GCCCCTTCGC CAACGCTGGC
GAGGCCGTAG TGCGCAACCT GCGTATCGCC ATCGAGCGCG TCAACGCTAG CGGCGGCGTC
AAGCTCCCCG ACGGGCCGCA TCCGTTCGAA CTGGTTACGT TCGATAGCAA GGGCAATGTC
GATGAAAGCC TGATCCAGTT CCGCAGTCTG GTCGACAAGC GCATTCCGTT TGTGCTGCAG
GGGAACAGCT CGGCCGTGGC CAGCGCGCTC GTAGGGGCAA TCAACCGTCA GAACGCACGC
CAGCCCGATG CCCGCGTGCT GTTCCTGAAC TATTCGGCCG TTGATCCATC GCTGACCAAC
GAGAACTGCA GCTTCTGGCA TTTCCGTTTT GACGCCAGCG CGGATATGCG AATGCAAGCG
TTGACCGAGG CCATCCGAAG CGAGCGTTCG GTGCGCAAGG TCTACCTGAT CGACCAGGAC
TACAGCTTCG GCCATCAGGT GGCGCGTTCG GCGCGTGAAA TGCTGGCGAC AAAGCGTCCG
GATATCCAGA TCGTCGGCGA CGAGTTCCAT CCGATCGGCA AGATCAAGGA TTTCGCGCCG
TATATCGCCA AGATCAAGGC GAGCGGCGCC GACGCGGTGA TCACCGGCAA CTGGGGCAAT
GATCTGACGC TGATGGTGAA GGCCGCGCGC GAGGGTGGCC TGAATGCGCG CTTCTACACG
TTTTATGGCA ACGGGCTCGG TGCGCCGGCA GCGATGGGTG ACGCGGGTGT GGGCCGGGTG
CTGGCCGTGG CGGAATGGCA CCCGAACGTA GGCGGGGCGG CATCCGATGC GTTCTACCAG
TCGTTCCGGG CGCGCTATCC GGATCCCAGG GATGACTATG TGCATCTACG CATGCAGATG
ATGGTGGAGA TGCTGGCGCG GGCTATCGAG CGCGCTGGTT CTACCGACGC CGTAGCCGTG
GGCTACGCGC TCGAGGACAT GCGTTTCACC AACGCGTTTC ACGAGGCCAC CGTGCGGGCG
GAAGACCACC AGGTCCTCCA GCCGCTTTAT GTCTCGGTCA TGGCGAAGCG GGGTGGCGAT
GTCCGCTTCG ACAATGAAGG CTCCGGCTAC GGATTCCGCA CGATAAAGAA GCTCAAGACC
GCCCAGACCA CACTGCCGAC CACGTGCCGT ATGGAGCGCC CGCCGCGCAA TTGA
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| Protein sequence | MRVWMAAALF CAAAAAQAQT GAPIRLGMID GLSGPFANAG EAVVRNLRIA IERVNASGGV
KLPDGPHPFE LVTFDSKGNV DESLIQFRSL VDKRIPFVLQ GNSSAVASAL VGAINRQNAR
QPDARVLFLN YSAVDPSLTN ENCSFWHFRF DASADMRMQA LTEAIRSERS VRKVYLIDQD
YSFGHQVARS AREMLATKRP DIQIVGDEFH PIGKIKDFAP YIAKIKASGA DAVITGNWGN
DLTLMVKAAR EGGLNARFYT FYGNGLGAPA AMGDAGVGRV LAVAEWHPNV GGAASDAFYQ
SFRARYPDPR DDYVHLRMQM MVEMLARAIE RAGSTDAVAV GYALEDMRFT NAFHEATVRA
EDHQVLQPLY VSVMAKRGGD VRFDNEGSGY GFRTIKKLKT AQTTLPTTCR MERPPRN
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