Gene Rmet_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0916 
Symbol 
ID4037712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1001107 
End bp1002000 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content61% 
IMG OID637976296 
ProductCDP-diacylglycerol--serine O-phosphatidyltransferase 
Protein accessionYP_583071 
Protein GI94309861 
COG category[I] Lipid transport and metabolism 
COG ID[COG1183] Phosphatidylserine synthase 
TIGRFAM ID[TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCCT TCAATCGACG CAACAAGCGC GTCAACAACG GTAACGTGAC GCACCTGCGT 
CCGTTTCGCC GTAACCAATT GCGCAACGAC AATGCGTATG ACCCGGACGA GCACGATCTG
GAGTACGTGC GTCCGCGCCG TCGTGGCATT TATCTGCTGC CCAACGCCTT TACCACCGCT
GCATTGTTCG CAGGCTTCTT TGCGATCGTG CAGGCGATGA ACATGCGCTT CGACGTGGCG
GCCATCGCAA TCTTTGCGGC GATGGTGCTC GATGGCATGG ATGGCCGCGT GGCCCGCATC
ACGAACACGC AGAGCGCGTT TGGCGAACAG TACGATTCGC TGTCGGACAT GACGTCGTTC
GGCGTGGCGC CGGCTCTGGT CATGTATGAG TGGATCCTGC ATGACCTGGG CAAGTGGGGC
TGGATTGCCG CCTTTGTCTA CTGCACTTGC GCGGCGCTAC GACTGGCGCG CTTCAATGCC
AATATTGGCG TGGTCGACAA GCGCTTCTTC CAGGGGCTGC CGAGCCCGGC TGCCGCGGCG
TTGGTGGCGG GCTTTGTCTG GCTGGCGATC GACAACAAGC TGCCCGTCAA GGAGCTCTGG
ATGCCGTGGG TCGCATTCGG CATCACGCTC TATGCCGGCT TGTCGATGGT GTCCAATGCG
CCGTTCTACA GCGGTAAGGC ACTGGATGTG CGCTATCGCG TGCCGTTCGG CATGATGGTG
CTGGTACTCG TGCTGTTCGT GGTCGTGTCT TCCGATCCAC CCGTGGCACT GTTTGGCCTG
TTCGTCGCCT ATGCGATTTC AGGTTACCTG CTTTGGGCAT GGCGAACGCT GCACGGTCAG
CGTGGCGGCG TCGACAAGTC GCGCGCGCCG GGCAACGGCT CAGGCGGCAA CTGA
 
Protein sequence
MGAFNRRNKR VNNGNVTHLR PFRRNQLRND NAYDPDEHDL EYVRPRRRGI YLLPNAFTTA 
ALFAGFFAIV QAMNMRFDVA AIAIFAAMVL DGMDGRVARI TNTQSAFGEQ YDSLSDMTSF
GVAPALVMYE WILHDLGKWG WIAAFVYCTC AALRLARFNA NIGVVDKRFF QGLPSPAAAA
LVAGFVWLAI DNKLPVKELW MPWVAFGITL YAGLSMVSNA PFYSGKALDV RYRVPFGMMV
LVLVLFVVVS SDPPVALFGL FVAYAISGYL LWAWRTLHGQ RGGVDKSRAP GNGSGGN