Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0888 |
Symbol | |
ID | 4037684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 972207 |
End bp | 973388 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637976268 |
Product | fatty acid desaturase |
Protein accession | YP_583043 |
Protein GI | 94309833 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.458623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCC CATCTGACAC CCTCTCGCCG GCCGACGCCG ACGCGATCTC GCAAGCGCCG AATCACGGCA CGAACCGCCC CAAACGCCCG GCCAAGAACA TTCCCCTGCC GGAGCCAATC GCCTTCGAGG CCCCATTTCC GAATCGCAAG ACGATCCGCA GCTGGCTGAT TCCCCTCGGC GGCCGCAGCA CCGCGCGCGC GCTGCTTCTG TTCGCGTTCG ATTACGCGCT GTTCGCTGCC GTACTGGCCG GTGTGGTCCT GGCATCACCC TGGTGGGCCA AGGTTGGGCT CGGCGTGCTG GCCGGACTGA TCATCGCGCG CCTGTTCATC ATTGGGCACG ATGCCTGCCA CCAGAGCCTG ACCGACCGTC GTGGCCTGAA CAAGTGGCTG GGCCGGCTCA CGTTCCTGCC GTCGCTCACG CCTTACAGCC TCTGGGAAGT CGGCCATAAC GTCGTCCATC ATGGTTACAC GAACCTGAAG GGCTTCGACT TCGTCTGGGC GCCCTACTCG CTCGAGGAAT TCCGCGCGCT GCCGCGCAGC CGCCGGATTC TGGAGCGCAT CTACCGCAAC GGCCTTGGCG CCGGCCTTTA CTACCTGATC GAGATCTGGT GGTTCAAGCT GTTCTTCCCC AGCAAGCGCC AGATGGCGAC GCGTCGCCCG ATCTTCATGT GGGACTGCGC GCTCGTGGGA GCTTTCGGCG CAGTCTGGAT CGGCGCGCTG GTATGGCTGG CCGTGGCCAC CGGGCAATCC CCGCTGCTGC TGGTCGGCAC CGGCTTCGTG CTGCCCTTCC TGATCTGGAA CGCCACCGTT GGCTTCGTGC TGTACGTCCA CCATACGCAT ACCAGCGTGG CGTGGTACGA CACCAAGGCC ATGTGGGCGA AGGCCCAGCC TTTCGTGTCG ACGACCGTGC ATCTGCGCTT CAACTTCGGC ATCGGCGCGG CCCTGCATCA CATCATGGAG CACACGGCCC ACCACGTGGA CATGAGCATC CCGCTGTACC AGCTCAAGCG CGCCCAGGCG CTGCTCGAGC ACGCACTGCC GGGTCGCATC ATCATCGAGA AGTTCTCGTG GCGCTGGTAT TTCCATACAG CCCACCGCTG CAAGCTCTAC GACTTCAAGG CGCTGTGCTG GACGGATTTC CGCGGTCGCC AAACCAGCGA AAACGCTCCG ACTCCGGTCT GA
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Protein sequence | MTAPSDTLSP ADADAISQAP NHGTNRPKRP AKNIPLPEPI AFEAPFPNRK TIRSWLIPLG GRSTARALLL FAFDYALFAA VLAGVVLASP WWAKVGLGVL AGLIIARLFI IGHDACHQSL TDRRGLNKWL GRLTFLPSLT PYSLWEVGHN VVHHGYTNLK GFDFVWAPYS LEEFRALPRS RRILERIYRN GLGAGLYYLI EIWWFKLFFP SKRQMATRRP IFMWDCALVG AFGAVWIGAL VWLAVATGQS PLLLVGTGFV LPFLIWNATV GFVLYVHHTH TSVAWYDTKA MWAKAQPFVS TTVHLRFNFG IGAALHHIME HTAHHVDMSI PLYQLKRAQA LLEHALPGRI IIEKFSWRWY FHTAHRCKLY DFKALCWTDF RGRQTSENAP TPV
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