Gene Rmet_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0887 
Symbol 
ID4037682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp971289 
End bp972014 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID637976267 
Producthypothetical protein 
Protein accessionYP_583042 
Protein GI94309832 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.159087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCG GTTATGGCGT GCGCAGCCCA GGACCTTGTG TCCAGTGCCT GGCGAGACCG 
ATGACCACAC CTTTCTGGCC GGGCCGGGAA AGGTGTGCGT CATTGGCATC TCGCGATGCA
TTTGCGGCCC GGTTATTCAA ACGACAAAAA ATGGAATCGT TCCTCGTCTC CACAGGCATC
GTCGCGCTCG CTGAAATGGG CGACAAGACG CAGTTGCTGT CGCTCGTCCT GGCCGCGCGC
TACCGCAAGC CAATTCCCAT CATTCTGGGC ATCCTGATCG CAACGCTGGT CAATCACGGC
TTTGCCGGCG CGCTCGGCGG CTGGATCACG GGCATGGTCG GCGTAGACCT GCTGCGCTGG
ATTCTTGGCC TCGGGTTCAT TGCGATGGCC GGCTGGATGC TGATTCCGGA CAAGCTCGAC
GACGCCGAGG AAGCCAAACC CGTCAAGGGT GCGCTCGGCA TCCTGGGCAC CACGATCATC
GCGTTCTTCT TCGCCGAGAT GGGCGACAAG ACGCAGATCG CCACCGTGGC GCTAGCCGCA
CGCTTCCATG GCGAAGTGAT TGCAGTGGTG GCCGGCACGA CGTTCGGCAT GATGCTCGCC
AATGCCCCGG CCGTCCTGCT GGGCGACCGT TTCGCCAATA AGATGCCAAT CGCCCTGGTG
CACAAGATCG CCGCTGCGAT CTTCCTGGTG CTGGGTCTGT TGGCGCTGTT CAACGTCGGC
GGCTGA
 
Protein sequence
MAGGYGVRSP GPCVQCLARP MTTPFWPGRE RCASLASRDA FAARLFKRQK MESFLVSTGI 
VALAEMGDKT QLLSLVLAAR YRKPIPIILG ILIATLVNHG FAGALGGWIT GMVGVDLLRW
ILGLGFIAMA GWMLIPDKLD DAEEAKPVKG ALGILGTTII AFFFAEMGDK TQIATVALAA
RFHGEVIAVV AGTTFGMMLA NAPAVLLGDR FANKMPIALV HKIAAAIFLV LGLLALFNVG
G