Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0887 |
Symbol | |
ID | 4037682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 971289 |
End bp | 972014 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637976267 |
Product | hypothetical protein |
Protein accession | YP_583042 |
Protein GI | 94309832 |
COG category | [S] Function unknown |
COG ID | [COG2119] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.159087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCG GTTATGGCGT GCGCAGCCCA GGACCTTGTG TCCAGTGCCT GGCGAGACCG ATGACCACAC CTTTCTGGCC GGGCCGGGAA AGGTGTGCGT CATTGGCATC TCGCGATGCA TTTGCGGCCC GGTTATTCAA ACGACAAAAA ATGGAATCGT TCCTCGTCTC CACAGGCATC GTCGCGCTCG CTGAAATGGG CGACAAGACG CAGTTGCTGT CGCTCGTCCT GGCCGCGCGC TACCGCAAGC CAATTCCCAT CATTCTGGGC ATCCTGATCG CAACGCTGGT CAATCACGGC TTTGCCGGCG CGCTCGGCGG CTGGATCACG GGCATGGTCG GCGTAGACCT GCTGCGCTGG ATTCTTGGCC TCGGGTTCAT TGCGATGGCC GGCTGGATGC TGATTCCGGA CAAGCTCGAC GACGCCGAGG AAGCCAAACC CGTCAAGGGT GCGCTCGGCA TCCTGGGCAC CACGATCATC GCGTTCTTCT TCGCCGAGAT GGGCGACAAG ACGCAGATCG CCACCGTGGC GCTAGCCGCA CGCTTCCATG GCGAAGTGAT TGCAGTGGTG GCCGGCACGA CGTTCGGCAT GATGCTCGCC AATGCCCCGG CCGTCCTGCT GGGCGACCGT TTCGCCAATA AGATGCCAAT CGCCCTGGTG CACAAGATCG CCGCTGCGAT CTTCCTGGTG CTGGGTCTGT TGGCGCTGTT CAACGTCGGC GGCTGA
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Protein sequence | MAGGYGVRSP GPCVQCLARP MTTPFWPGRE RCASLASRDA FAARLFKRQK MESFLVSTGI VALAEMGDKT QLLSLVLAAR YRKPIPIILG ILIATLVNHG FAGALGGWIT GMVGVDLLRW ILGLGFIAMA GWMLIPDKLD DAEEAKPVKG ALGILGTTII AFFFAEMGDK TQIATVALAA RFHGEVIAVV AGTTFGMMLA NAPAVLLGDR FANKMPIALV HKIAAAIFLV LGLLALFNVG G
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