Gene Rmet_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0881 
Symbol 
ID4037676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp965180 
End bp965701 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content65% 
IMG OID637976261 
Producthypothetical protein 
Protein accessionYP_583036 
Protein GI94309826 
COG category[S] Function unknown 
COG ID[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03164] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0178119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA CCACCTACAC GATCGCCCAA CTCAACACGA TGCCCGAGGC CGAATTCATC 
GCGGTCCTCG GCGGCATCTA CGAACACTCC CCCTGGTTCG CCGAAACGGC GGCGCGCAAG
CGCCCCTTCG CCAATACGGC GGAACTGGCG TCGGCCCTGC GCGGCGCCGT GGATGCCGCG
GGCCAGGAAG CGCAACTCAA GCTCGTGCGC GCTCACCCGG AACTGGCGGG CAAGGCCGCG
GTGCGCGGCG AACTGACGGC GGAATCCACG CGCGAGCAGG CTGGCGCCGG ACTCGATCAG
TGCACGCCCG AGGAATTCCA GCGCCTGCAG GGACTGAACG AAGCCTACAA CCGGAAGTTC
GGCTTCCCGT TCATCCTCGC GGTCCGCGGC TATGACCGGC ACGGCATCAT CGACGCTTTT
GCAAGGCGCC TGGAAAACGC CCCGGAGGTC GAGTTGCAAA CTTGCATCAA CCAGATTCAT
CGGATTGCGC AGTTCCGTCT GAACGACTTA GTATCCGCCT GA
 
Protein sequence
MSQTTYTIAQ LNTMPEAEFI AVLGGIYEHS PWFAETAARK RPFANTAELA SALRGAVDAA 
GQEAQLKLVR AHPELAGKAA VRGELTAEST REQAGAGLDQ CTPEEFQRLQ GLNEAYNRKF
GFPFILAVRG YDRHGIIDAF ARRLENAPEV ELQTCINQIH RIAQFRLNDL VSA