| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0878 |
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| Symbol | |
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| ID | 4037673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 960937 |
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| End bp | 963258 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976258 |
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| Product | malic enzyme |
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| Protein accession | YP_583033 |
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| Protein GI | 94309823 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.716606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA AGACCACCGG TGATGCACCG CAACATGCCC CCAATAGTCC CGAAGCGCAA
CTGCGCCTGG CTGCGCTGGA ATACCACCGC AGCCCGACCA AGGGCAAGAT CCAGGTAACG
GCCACCAAGG CCCTGTCCAA TCAGCGTGAC CTGTCGCTGG CCTACTCCCC GGGCGTGGCC
TACGCCTGCG AAGAAATCCA CAAGGACCCC GCGATGGCCG CCGAGTACAC CTCGCGCGCC
AACCTCGTGG CCGTGGTGAC CAACGGTACC GCCGTGTTGG GCTTGGGCGA CATCGGTCCG
CTGGCCGGCA AGCCCGTGAT GGAAGGCAAG GGCTGCCTGT TCAAGAAATT CGCCGGCATC
GACGTGTTCG ACATCGAACT CGATGCACGC GACCCGGACA AGATCGTCGA GATCGTAGCG
GCGCTGGAGC CGACGCTTGG TGGCGTGAAC CTCGAAGACA TCAAGGCTCC CGAGTGCTTC
TACATCGAGC AGAAGCTGCG CGAGCGCATG AACATCCCCG TCTTCCACGA CGATCAGCAC
GGCACGGCGA TCATCTCGAC CGCGGCGCTG CTGAACGGCC TGAAGGTGGT AGGCAAGGAC
ATCGCGAAGG TCAAGCTGGC CGTCTCGGGC GCGGGCGCCG CCGCAATCGC GTGCCTGGAT
ACGATGGTCA GCCTGGGCGT GAACCGCGAG AACATCTACG TGGTCGACTC GAAGGGCGTG
ATCTTCCAGG GCCGCGACGC GAACATGGAG GCCAACAAGG CTCGCTACGC GCAGGACACG
TCGGCCCGCA CGCTGGCCGA CATCGTCAAG GATGCGGACG TGTTCCTGGG TTGCTCGACC
GCGGGCGTGC TGACCGGTGA CATGGTCAAG ACCATGGCCG ACCGTCCGAT CATCCTGGCG
CTGGCCAACC CGGAGCCGGA AATCCGCCCG GAAGTGGCCA AGGCCGCGCG TCCGGACTGC
ATCATCGCCA CGGGCCGTTC GGACTATCCG AACCAGGTCA ACAACGTGCT CTGCTTCCCG
TACATCTTCC GCGGCGCGCT CGATTGCGGC GCCACGAAGA TCACCGAAGC GATGAAGCTG
GCCTGCGTGA AGGCGATCGC CGAGCTGGCC GAAGCCGAAC TGAACGATGC CGTGGCCGCA
GCCTACGGTG GTCGTGAACT GAAGTTCGGC CCGGACTACA TCATCCCGAC GCCGTTCGAC
CAGCGCCTGA TCGAGAAGAT TGCACCGGCC GTTGCCAAGG CCGCCGAGGA ATCCGGCGTG
GCCACGCGCC CGATCAAGGA CCTTGAAGCC TACCGCCAGC AACTGACCAG CTACGTGTAC
CACACCGGCA TGATCATGAA GCCGGTGTTC ACGGCCGCCA AGGCCGCGCC GAAACGCGTC
GCCTACGCCG AAGGTGAAGA AGAGCGTGTG CTGCGTGCGG TGCAGGGCGT GGTGGACGAA
GGTCTGGCCC GTCCGATCCT GATCGGTCGC CCGCACGTGA TCCAGATGCG TATCGACAAG
GCGGGCCTGC GTCTGCGCCC GGGCGTCGAT TTCGAACTGA TCAACCCCGA GGATGATCCG
CGTTATCGCG CCTATCACGA GGAGTACCAC GCGCTGCGCG GTCGCGACGG CGTGACGCCG
GACATGGCCA AGGTGGCGCT GCGTCGTTCG AATACGCTGA TCGGCACGAT GCTGATGCAC
ATGGGTGATG CCGATGCACT GTTGTGCGGC ACGGTGGGCC GGTTCGAGGC GCATCTGGAA
CACGTGCGCG ACGTGATCGG CCTGGCGCCG GGCGCCAAGG TGTTCGCGGC CATGAACGCG
CTGATGCTCG AAAAGTACAC GCTGTTCATC ACGGATACGT TCGTCAACGA TGATCCGAGC
GCCGAGGAAC TGGCTGCCAT CACGCAGCTT GCAGCCGAGG AAATCGCACG CTTCGGCCTG
CACCCGAAGG TTGCGATGAT GTCGCACTCG ATGTTCGGTT CGTCGAACCG CCCGTCGGCG
CGCAAGATGC GCGACGCGGC CGAGATCCTG GCCCGCGTGG CACCGCAGCT CGAAGTGGAA
GGCGAGATGC AGGGCGATGC GGCACTGGTC GAAGACGTGC GCCGTCATTT CCTGCCGGGC
ACCAAGCTGG CCGGCAGCGC CAATCTGCTG GTGATGCCGA CGCTGGACGC CGCCAACATC
GCGTTCAATC TGCTCAAGAT CACGGGCGGC CAGGGCGTGA CGGTGGGTCC GATCCTGCTG
GGCGCAGCCA AGCCGGTGCA CATCCTGAAT CCGCAGGCGA CCACGCGCCG TATCGTCAAC
ATGACGGCCG TGGCCGTGGC GGAGTGCAAC GCCACCCGCT GA
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| Protein sequence | MSSKTTGDAP QHAPNSPEAQ LRLAALEYHR SPTKGKIQVT ATKALSNQRD LSLAYSPGVA
YACEEIHKDP AMAAEYTSRA NLVAVVTNGT AVLGLGDIGP LAGKPVMEGK GCLFKKFAGI
DVFDIELDAR DPDKIVEIVA ALEPTLGGVN LEDIKAPECF YIEQKLRERM NIPVFHDDQH
GTAIISTAAL LNGLKVVGKD IAKVKLAVSG AGAAAIACLD TMVSLGVNRE NIYVVDSKGV
IFQGRDANME ANKARYAQDT SARTLADIVK DADVFLGCST AGVLTGDMVK TMADRPIILA
LANPEPEIRP EVAKAARPDC IIATGRSDYP NQVNNVLCFP YIFRGALDCG ATKITEAMKL
ACVKAIAELA EAELNDAVAA AYGGRELKFG PDYIIPTPFD QRLIEKIAPA VAKAAEESGV
ATRPIKDLEA YRQQLTSYVY HTGMIMKPVF TAAKAAPKRV AYAEGEEERV LRAVQGVVDE
GLARPILIGR PHVIQMRIDK AGLRLRPGVD FELINPEDDP RYRAYHEEYH ALRGRDGVTP
DMAKVALRRS NTLIGTMLMH MGDADALLCG TVGRFEAHLE HVRDVIGLAP GAKVFAAMNA
LMLEKYTLFI TDTFVNDDPS AEELAAITQL AAEEIARFGL HPKVAMMSHS MFGSSNRPSA
RKMRDAAEIL ARVAPQLEVE GEMQGDAALV EDVRRHFLPG TKLAGSANLL VMPTLDAANI
AFNLLKITGG QGVTVGPILL GAAKPVHILN PQATTRRIVN MTAVAVAECN ATR
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