| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0876 |
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| Symbol | pepN |
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| ID | 4037671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 957196 |
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| End bp | 959889 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976256 |
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| Product | aminopeptidase N |
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| Protein accession | YP_583031 |
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| Protein GI | 94309821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCA CCGATACGCC CGTCACCGTC TATCGCAAGG ACTATACTCC GCCCGCTTTC
GCCATCGACC ACGTGGATCT CGTGCTCGAC CTCGATCCGC AGCGTACCGT CGTCACCAGC
ACGCTGAAGA TCCAGCGCAC CGGCACGGCC GACGCGCCGC TGGTTCTGGC CGGCGAGGAG
CTGGAACTGG TTGGCGTGCG CCTCGATGGC CAGCCGTTCT CCGGCGTCAA GCAGGACGGC
GACTCGCTGA CCCTGACTGG CCTGCCGGGA ACTGGCACGC TGGAAATCAC CACGGCCTGC
AATCCCGCCG CCAATACCAC GCTGTCCGGC CTGTACGTCT CCAACGGCAA CTTCTTCACC
CAGTGCGAAG CCGAGGGCTT TCGCCGCATC ACGTATTTCC TGGATCGCCC GGATGTGATG
ACGACCTACC GCGTTACGCT GCGCGCCGAT CGCGCCGCAA GCCCGGTACT GCTTTCGAAC
GGCAACCTGC TCTCGCAACG CGATCTGCCG GATGGCAAAC ACGAAGCCGT CTGGGAAGAC
CCGTTCCGCA AGCCGTCATA CCTGTTCGCG CTCGTGGCCG GCAAGCTCGA GCGCATCGAG
CAAACCATCG TTTCGGCATC GGGCAAGCAA AAGCTGCTGC AAGTCTGGGT CGAGCCGCAG
GACCTGGACA AGACGCGTCA CGCGATGGAC TCGCTGGTTC ACGCGATCCG CTGGGACGAG
CAGCGCTTCG GCCTGGAACT TGACCTCGAC CGTTTCATGA TCGTCGCCGT GGGCGACTTC
AACATGGGGG CGATGGAAAA CAAGGGCCTG AACATCTTCA ACACCAAGTA TGTGCTGGCC
AACGCCCAGA CCGCGACGGA TGTCGACTTC GCCAATATCG AATCGGTGGT GGCCCACGAG
TACTTCCATA ACTGGACCGG CAACCGCGTG ACCTGCCGCG ACTGGTTCCA GTTGTCGCTC
AAGGAAGGCC TGACCGTGTT CCGCGACCAG GAATTCTCGG CCGACATGAT GGGCTCGGAA
TCGGGCCGCG CGGTCAAGCG CATCGAGGAT GTGCGCGTGC TGCGCCAGGT GCAGTTCCCC
GAGGATGCGG GTCCGATGGC CCACCCGGTG CGCCCGGACA GCTACGAGGA AATCAACAAC
TTCTACACGG TCACGGTCTA CGAGAAAGGC GCCGAAGTCG TGCGGATGTA CCAGACTCTG
CTTGGCCGTG ACGGCTTCCG CAAGGGGATG GACCTGTACT TCCAGCGTCA TGACGGCCAG
GCGGTGACAT GCGACGACTT CCGCGCGGCG ATGGCTGACG CGAACGGCCG CGACCTGAAG
CAGTTCGGCC TCTGGTACAG CCAGGCTGGC ACGCCCGTGG TCACGGTCAA GACCGCGTGG
GACGGCGCCT CCGGCACGCT GACGCTGACG TTGTCGCAGC GCTGCCCGAA GGTCGGCATC
GAAACGCGCG CTGGCATGCC GGACAAGCAA CCGTTCCACA TCCCGTTCGC GCTCGGCCTG
ATCGACGCGG AAGGCAATGA CCTGCCGCTG CAACGCGAAG GGGAACCCAA GGCAGGCGCG
AGCACGCGCG TGCTCGATTT CACGCAGGCC GAGCAGACCT TCCGCTTCAT CAACCTGCCT
CGCGGTGGCA AGGCGCCATT GCCCTCGCTG CTGCGTAATT TCTCGGCACC AGTCGTTGTC
GATTACGAAT ACAGCGATGC GGAACTGACA TTTCTTCTCT CGCACGACAC CGACGCATTC
AACCGCTGGG AAGCCGGCCA ACGCCTGGCC ACGCGCGCGC TACTGCATCT GGTGGCCGAC
GTCCAGGCCA ATCGTGAACT GAAGCTCGAC CCGGCGCTGG TGTCGGCGTT CCGCAGCGTG
CTCACCGATG GCGCGCTGAA TCCCGCCTTC CGCGAACAGG CACTGATGCT CCCCGCGGAG
GCCTATCTGG CCGAACGCAT GGGCGTGGCC GACCCGACGG CGATTCACCG CGCACGTCTG
TTCCTGCGCG AAGGCCTGGC GCGCACGCTC AAGGCCGAAT GGCTGGCCGC ATACGAGGCC
AACGCGACAC CGGGCGAATA CAGCCCCGAT GCCGACTCGA TGGCCCGTCG CGCGCTGCGC
AATCTCGCGC TCGGCTATCT GGCCGACAGC GGAGACGCCG ACATGCAGGC ACTTGCGGAC
CGCCACTACC AGCAGAGCGA CAACATGACA GACCGCTTCG CCGCGCTGTC TGCGCTGGTC
AACAGCTTCG CACCGGGCCG CGAACACGCG CTGGCCGATT TCTACGAGCG CTTCGAGGAC
GACGCGCTGG TCATCGACAA GTGGTTCTCG CTGCAGGGAA TGCAGCGCGG CGAAGTTGGC
CCGCACGCGG GCAAGCGCAC CATTGATACC GTGCGCGCGC TGATGCAGCA TCCGGCCTTC
AATCTGCGCA ACCCGAATCG CGCCCGTTCG CTGATCTTCA GCTTCTGCTC GGGCAACCCA
GCGCAGTTCC ACGCCGAGGA CGGCTCGGGC TACGCATTCT GGGCCGACCA GGTACTGGCG
CTGGATGCGA TCAACCCGCA GGTGGCCGCG CGCCTGGCAC GCGTCATGGA CCGCTGGCAG
AAGTACGAGA TGCCGCTGCG CGAACGGATG CGCGCGGCGC TGGAACGCGT GGCCGCCTCG
TCGACGCTGT CGCGCGATGT GCGCGAGATC GTCAGCAAGG CCCTGTCGGC CTGA
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| Protein sequence | MLRTDTPVTV YRKDYTPPAF AIDHVDLVLD LDPQRTVVTS TLKIQRTGTA DAPLVLAGEE
LELVGVRLDG QPFSGVKQDG DSLTLTGLPG TGTLEITTAC NPAANTTLSG LYVSNGNFFT
QCEAEGFRRI TYFLDRPDVM TTYRVTLRAD RAASPVLLSN GNLLSQRDLP DGKHEAVWED
PFRKPSYLFA LVAGKLERIE QTIVSASGKQ KLLQVWVEPQ DLDKTRHAMD SLVHAIRWDE
QRFGLELDLD RFMIVAVGDF NMGAMENKGL NIFNTKYVLA NAQTATDVDF ANIESVVAHE
YFHNWTGNRV TCRDWFQLSL KEGLTVFRDQ EFSADMMGSE SGRAVKRIED VRVLRQVQFP
EDAGPMAHPV RPDSYEEINN FYTVTVYEKG AEVVRMYQTL LGRDGFRKGM DLYFQRHDGQ
AVTCDDFRAA MADANGRDLK QFGLWYSQAG TPVVTVKTAW DGASGTLTLT LSQRCPKVGI
ETRAGMPDKQ PFHIPFALGL IDAEGNDLPL QREGEPKAGA STRVLDFTQA EQTFRFINLP
RGGKAPLPSL LRNFSAPVVV DYEYSDAELT FLLSHDTDAF NRWEAGQRLA TRALLHLVAD
VQANRELKLD PALVSAFRSV LTDGALNPAF REQALMLPAE AYLAERMGVA DPTAIHRARL
FLREGLARTL KAEWLAAYEA NATPGEYSPD ADSMARRALR NLALGYLADS GDADMQALAD
RHYQQSDNMT DRFAALSALV NSFAPGREHA LADFYERFED DALVIDKWFS LQGMQRGEVG
PHAGKRTIDT VRALMQHPAF NLRNPNRARS LIFSFCSGNP AQFHAEDGSG YAFWADQVLA
LDAINPQVAA RLARVMDRWQ KYEMPLRERM RAALERVAAS STLSRDVREI VSKALSA
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