| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0867 |
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| Symbol | |
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| ID | 4037661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 945964 |
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| End bp | 947442 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637976246 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_583022 |
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| Protein GI | 94309812 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGCAAG GACCCGCCGC TTCGCGGCTC GACGATGACT ATCGAACGCT GTTCCAGCTA
GCGCCCGTTT CGCTGTGGCT GGAGGATTTT AGCGCGGTGC GGCAGGCCTT CACGCAGTTG
CGGGCCGATG GCGTCACCAA TCTGCGCCGC CACCTGCGCG ACAACCCCTC GGAAGTGGCA
CGGTGCTCTT CTCTAATTCG CGTGCTCGAC GTCAACCGCC GGACGCTGGA CCTCTTCCGC
GCCGTCGATC TGGATACGCT GGTTGCCAAC CTCCACACCG TGTTTCGCGA CGACATGTTC
GATCAACACG TCGAGGAACT CGGACAACTG TGGGACGGCG ACAATCGTTT CTCGAGCCAG
ACCGTCAACT ACACGCTCGA CGGCGAACGG CTCGACATCC GTCTGGAGGC CCGCGTCATG
CCTGGGCACG AGGACGACTG GTCGCGTGTG CTGCTGTCGA TCGAGGACAT CACGGCCCGC
GTGCGCAATG AACGTGACCT GCGCCGGGCC CAGCAGTACG CCGTGGGCCT GTTCGAGCAT
TCGCCGGTAT CGCTCTGGGT GGAAGATTTC AGCGTGGTCA AGATGCTGCT CGACGAAGTC
CGCGCGGCAG GGATCACGGA TTTCCGCACG TTCCTGAACG TGCACCCCGA TTTCGTCTCG
CGCTGCATGC AGGAGATCCG CGTGCTCGAC GTCAACCAGC AGACGCTGGC GATGTTCGGC
GCACCCAGCA AGGAAATCCT GCTTTCGCGA CTCGGCGACG TGTTTCGCGA CGACATGCGC
ATCCACTTTG CCGAGCAACT GGTCGACCTC TGGCATGAAA AGCTGTGGCA GCAACGCGAA
GTCATCAACT ACGCGCTGGA CGGCCGCCCG GTGGACGTGT TCATGCAGTG GTCGGTATTT
CCGGGGCGAG AGGCTGACTG GGACCAGGTG CTGGTGTCGC TGACCGACAT CACGGCACGC
AAGAAGGCCG AAGCCTACGT CGAGTTCCTC GGCAAGCACG ATGTGCTTAC CAAACTCTAC
AACCGCGCGT ACTACGAGGA TGAACTGGCG CGGCTGGGCC GCAAGGGGCC GTGGCCGGTC
AGCGTGATCG CGGTGGACCT GAATGGACTG AAGGCCGTGA ACGATCAGTT CGGCCACGGG
GACGGCGATG GCCTGCTACG CCGCACTGGC GAAGTGCTGA AGAAAGCCGT GGGCGAACAG
GCATGCATTG CGCGCACCGG TGGCGACGAG TTCATGGTGC TGCTTCCCGG ACGCGACGAA
CGGGGTGCAG CGACGGTGGT GGAGCAGATC GAAGAGGTGG TCGTCCTCAA CAACCAGTTC
TATCCCGGGG CGCGGCTTTC ATTCTCGATC GGGTCGGCCA CCTGCATGCA GGGAGACCGC
CTGACCGATG CCGTGAAAAC TGCGGACAGA CGGATGTACG ACGCCAAGCG CGCCTACTAC
GAGGCGCTGG GCAACGAACG CGCGACGCAG AACGACTGA
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| Protein sequence | MAQGPAASRL DDDYRTLFQL APVSLWLEDF SAVRQAFTQL RADGVTNLRR HLRDNPSEVA
RCSSLIRVLD VNRRTLDLFR AVDLDTLVAN LHTVFRDDMF DQHVEELGQL WDGDNRFSSQ
TVNYTLDGER LDIRLEARVM PGHEDDWSRV LLSIEDITAR VRNERDLRRA QQYAVGLFEH
SPVSLWVEDF SVVKMLLDEV RAAGITDFRT FLNVHPDFVS RCMQEIRVLD VNQQTLAMFG
APSKEILLSR LGDVFRDDMR IHFAEQLVDL WHEKLWQQRE VINYALDGRP VDVFMQWSVF
PGREADWDQV LVSLTDITAR KKAEAYVEFL GKHDVLTKLY NRAYYEDELA RLGRKGPWPV
SVIAVDLNGL KAVNDQFGHG DGDGLLRRTG EVLKKAVGEQ ACIARTGGDE FMVLLPGRDE
RGAATVVEQI EEVVVLNNQF YPGARLSFSI GSATCMQGDR LTDAVKTADR RMYDAKRAYY
EALGNERATQ ND
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