Gene Rmet_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0849 
Symbol 
ID4037641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp930160 
End bp930678 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID637976226 
Product17 kDa surface antigen 
Protein accessionYP_583004 
Protein GI94309794 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAC AACGTAAACC GTGGCAGGTC CTTGGTGCTG CCGGTGCTCT GGCGCTGGTG 
GCCGGACTGG CCGGTTGTGC GCAGCCGGGC TATGGCGGTT ACGGCAACTA CAGCACGGCG
CCGCCGCCGA CTGGTTATCA ACAGCCGGGA ACCAACACCT ATCAGGCGCC TGCCGGTTCG
GTGTTCGTGG GTCGCGTGGA ATCGATCGAG CCGGTCCAGA CCACGCAGGG CAGCTCGGGC
ATTCTGGGCA CCGTGATTGG TGGTGCAGCC GGCGGTTTGC TTGGACACCA GATCGGTGGC
GGTTCTGGCC AGACCGTGGC AACGATCGTC GGCGCGGTGG GTGGCGCAGT GGCGGGTAAT
CAGATCGAGA AGCGGGCCGG GTCGAACACC AGCACTGCGT ATCGCGTCAA TGTCCGACTG
GACGATGGCC GCGTGGCGAC GGTGACGCAA AGCAATATCG GCAACCTGCG CGTCGGCGAT
CGCGCGCGAG TGGCCAACGA TATGGCGACG GCGTACTAA
 
Protein sequence
MQEQRKPWQV LGAAGALALV AGLAGCAQPG YGGYGNYSTA PPPTGYQQPG TNTYQAPAGS 
VFVGRVESIE PVQTTQGSSG ILGTVIGGAA GGLLGHQIGG GSGQTVATIV GAVGGAVAGN
QIEKRAGSNT STAYRVNVRL DDGRVATVTQ SNIGNLRVGD RARVANDMAT AY