Gene Rmet_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0838 
Symbol 
ID4037629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp917498 
End bp918184 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content62% 
IMG OID637976214 
Productputative hydroxylase 
Protein accessionYP_582993 
Protein GI94309783 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.143447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATTC AGATACCCAA TGTCCTCACG CCGGAGGAAG TCCGGTACTG CAGGCAACGG 
CTGGAAAGTT CGAACTGGGT CGACGGTCGC GTTACTGCGG GCGATCTCGC GGCCCAGTCC
AAGCTCAATC TGCAGATTCC CGTCGATAGC GAGGTAGCAC AGGAACTCGG CGAGTTCATC
CTGACCGCGC TGGGTCGCAA TGCCTCGTAT CACTCCGCCG CGCTGCCTCT GCGCGTCTTG
CCGCCGATGT TCAATCGCTA TGAAGGCGGC ATGACATTCG GCACGCACGT GGACAATGCC
ATCCGTACCG TGCCGGGCAC CGGCGGGATG CGTATCCGCG CCGATGTCTC TAGCACGCTC
TTCCTGACCG ATCCCGACGA GTACGACGGC GGAGAACTCG TGATCAAGGA CCTGTACGGT
AGCCATACGG TGAAGCTGCC GGCCGGGCAC ATGGTGGTCT ATCCTGCGTC GTCGCTGCAC
GCCGTGACTC CGGTCACGCG CGGCGCTCGC TGGGCTTCGT TCTTCTGGGC GCAATCGATG
GTCAAGGACG ACGGCCAGCG GACGATGCTC TACGAACTCG ATCTGACGAT CATGGAAGTC
CGCAGGCAAC TCGGCGACGA CAAAGACGCC GTGCTCGCGC TGGTCAACCA CTATCACAAC
CTGCTCAGGC GCTGGGCAGA GCTTTGA
 
Protein sequence
MLIQIPNVLT PEEVRYCRQR LESSNWVDGR VTAGDLAAQS KLNLQIPVDS EVAQELGEFI 
LTALGRNASY HSAALPLRVL PPMFNRYEGG MTFGTHVDNA IRTVPGTGGM RIRADVSSTL
FLTDPDEYDG GELVIKDLYG SHTVKLPAGH MVVYPASSLH AVTPVTRGAR WASFFWAQSM
VKDDGQRTML YELDLTIMEV RRQLGDDKDA VLALVNHYHN LLRRWAEL