Gene Rmet_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0835 
Symbol 
ID4037626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp912828 
End bp913883 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content66% 
IMG OID637976211 
Producthypothetical protein 
Protein accessionYP_582990 
Protein GI94309780 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0180096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0225936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGA CACTCTCGCC CATTGCGGCG CAAGGGGGCA CGCGGCGCGT GTCCCACCTC 
TCCACGTTGC TGCGCCGCTG CCTTGGTGTG GCCATCGCAT TGGCCGCCGG GGCGACCGTA
AGCACCACCG CGCTGGCTAA CACCACCGGG ACCACCGCGT GGCCGCAGAA GGCCGTTACG
GTGGTCGTGC CGTTCCCGGC TGGCGGTTCC ACCGACACCA TCGCGCGGAT GCTGGCGGCC
CCGCTCAACG AGAAGCTTGG TCAGCCGTTC GTGATCGACA ACCGGCCGGG GGCTACCGGC
GCGATCGGCG CGACGTTCGT CAAGCGCGCA CCCGCTGATG GCTACACGAT GATGGTGGCG
TCGATCGGTG TCTATGCCGT CAATCCGTTC CTGCAGAAGA ACCTGCAGTA CGACCCGGCC
AAGGACTTCG ACCTGCTCAC CGTGGCCGTG CGCGCGCCCA ATGTGCTGGT CGCCAATCCG
AACTTCCCGG CCAAGACGCT GCAAGAACTG GTGGCCTACA TGAAGAAGAA CCCGGGCAAG
GTCAGCTTCG CCACGTCGGG GGCCGGTTCG TCCGACCATC TGACCGCGGC GCTGTTCTGG
CAGAAGAGCG GCACGGATGG CTTGCATGTG CCGTACAAGG GCGGCGCGCC CGCGATCTCG
GATCTGCTGG CCGGCCAGGT GGACGTGTCC TTCCAGAACA TCAACGCGGT GCTTCAGCAC
ATCCGCTCGG GCAAACTGCG CGCGCTGGCC GTAACGTCAG ACAAGCGGTC GGCTGTGCTG
CCGAACGTGC CGACCATGGC CGAGGGCGGC GTGAAGGACG TGGAGGTGTA TTCGTGGCAG
GGCGTGGCGG CGCCGAAGGG CCTGCCTGCC GATGTGAAAT CGCGCCTGCA TGGGGCCATC
GTGACGGCAC TCAAGGACGC GAAGATGCAG CAGAAGCTCA ATGAGCAGGG CTTCGAGGTC
GTGGGGAACT CTCCCGAGCA ATTCGCGGAG TTCGAGACGC AGGAGCTCAA GCGGTGGAAG
ACCGTGATCG AGCAGGGCAA GATCACGGCC GAGTGA
 
Protein sequence
MFQTLSPIAA QGGTRRVSHL STLLRRCLGV AIALAAGATV STTALANTTG TTAWPQKAVT 
VVVPFPAGGS TDTIARMLAA PLNEKLGQPF VIDNRPGATG AIGATFVKRA PADGYTMMVA
SIGVYAVNPF LQKNLQYDPA KDFDLLTVAV RAPNVLVANP NFPAKTLQEL VAYMKKNPGK
VSFATSGAGS SDHLTAALFW QKSGTDGLHV PYKGGAPAIS DLLAGQVDVS FQNINAVLQH
IRSGKLRALA VTSDKRSAVL PNVPTMAEGG VKDVEVYSWQ GVAAPKGLPA DVKSRLHGAI
VTALKDAKMQ QKLNEQGFEV VGNSPEQFAE FETQELKRWK TVIEQGKITA E