| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0834 |
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| Symbol | |
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| ID | 4037625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 911378 |
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| End bp | 912733 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976210 |
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| Product | D-glucarate dehydratase |
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| Protein accession | YP_582989 |
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| Protein GI | 94309779 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.608839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0271686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCG CTTCCCTTCA AGGCGCCGCT GGTGCCACGC CTGTCGTCAC TGAACTGACC
GTTGTCCCCG TCGCCGGCCA CGACAGCATG CTGATGAACC TGTCGGGGGC CCACGGCCCG
TACTTCACCC GCAACATCGT GATTCTGCGC GACAGCGCAG GCAATACCGG CGTTGGCGAA
GTGCCGGGCG GCGAGGGCAT TCGCAAGACG CTCGAGGACG CGCGCCCGCT CGTGGTGGGT
CAACCGATCG GCCAGTATCA GGCGATGCTG AACAAGGTTC GAGCCACGTT CGCGAGCCGC
GATGCCGGGG GACGTGGTCT GCAGACCTTC GACCTGCGCA TCACGATCCA TGCCGTGACC
GCGCTTGAAG CTGCGCTGCT CGATCTGCTC GGCAAGCACC TTCAGGTGCC CGTGGCGGCC
CTGCTCGGCG AAGGCCAGCA GCGCGACGCG GTGGAGATGC TGGGCTACCT GTTCTACGTC
GGTGATCGCC AGCGTACGAC GCTTGACTAT CGCACCGAGC CCGATGCGGA CAACGAATGG
TTCCGCCTGC GCAATGAAGT GGCGATGGAT GCGAAAGGCG TGGTGCGACT GGCCGAGGCC
GCGTACGAGC GCTACGGCTT CAACGATTTC AAGCTCAAGG GTGGCGTGCT GAGCGGTGAC
GAGGAAATGG AGGCGATCCT CGCGCTGCAT GAGCGTTTTC CGAAAGCACG CGTCACGCTC
GACCCGAACG GCGGCTGGCT GCTGGCCGAC GCGATCCGCC TCTGCCGCGA CAAGCATGGC
GTGCTGGCCT ATGCGGAGGA TCCCTGCGGC GCCGAGGACG GCTATTCGGG CCGCGAGATC
ATGGCCGAGT TCCGCACTGC CACCGGACTA CCTACGGCCA CCAACATGAT CGCCACCGAC
TGGCGTCAGA TGGGTCATGC GGTGCGCCTG CATTCGGTCG ACATTCCGCT GGCCGATCCG
CACTTCTGGA CCATGCAGGG CTCGGTCCGC GTGGCGCAGA TGTGCGCGGA GTGGGGGCTG
ACCTGGGGCT CGCACTCGAA CAATCACTTC GATATTTCGC TGGCGATGTT CACGCATGTG
GCCGCCGCCG CGCCGGGCCG CGTGACGGCA ATCGACACGC ACTGGATCTG GCAGGACGGT
GAGCACCTGA CACGCAACCC GCTCAGGATC GAAGGTGGCC TGGTGCAGGT ACCGAAGACA
CCTGGTCTGG GCGTGGAGCT GGATATGGAT GCGCTCGCGC GCGCCAACCG CCTCTATCAG
GAAAAGGGAC TCGGCGCGCG CGACGATGCG ATCGCGATGC AGTTCCTGAT CCCTGGCTGG
AAGTTCAACA ACAAGATGCC CTGCATGGTG CGCTGA
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| Protein sequence | MNAASLQGAA GATPVVTELT VVPVAGHDSM LMNLSGAHGP YFTRNIVILR DSAGNTGVGE
VPGGEGIRKT LEDARPLVVG QPIGQYQAML NKVRATFASR DAGGRGLQTF DLRITIHAVT
ALEAALLDLL GKHLQVPVAA LLGEGQQRDA VEMLGYLFYV GDRQRTTLDY RTEPDADNEW
FRLRNEVAMD AKGVVRLAEA AYERYGFNDF KLKGGVLSGD EEMEAILALH ERFPKARVTL
DPNGGWLLAD AIRLCRDKHG VLAYAEDPCG AEDGYSGREI MAEFRTATGL PTATNMIATD
WRQMGHAVRL HSVDIPLADP HFWTMQGSVR VAQMCAEWGL TWGSHSNNHF DISLAMFTHV
AAAAPGRVTA IDTHWIWQDG EHLTRNPLRI EGGLVQVPKT PGLGVELDMD ALARANRLYQ
EKGLGARDDA IAMQFLIPGW KFNNKMPCMV R
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