| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0831 |
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| Symbol | alaS |
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| ID | 4037622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 905964 |
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| End bp | 908618 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976207 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_582986 |
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| Protein GI | 94309776 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.168627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.137566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTCGAC GCCGGCTGCG CCCGCACAAC ATGAAAGTCT CCGACATTCG CAGCAAGTTC
CTTCAGTTCT TCGAGTCGAA GGGCCACACG GTGGTCCGCT CGTCCAGCCT GGTGCCGGCG
AACGACCCGA CGCTGCTGTT TACCAATTCG GGCATGGTGC AGTTCAAGGA CGTGTTCCTC
GGCACTGACA AGCGTCCCTA CGTGCGCGCC ACGTCGTCGC AGCGCTCGGT GCGCGCCGGC
GGCAAGCACA ACGACCTCGA GAATGTGGGT TACACGGCAC GTCACCACAC GTTCTTCGAA
ATGCTGGGCA ATTTCTCGTT CGGCGACTAC TTCAAGCGCG AGGCCATCCA GTACGCGTGG
GAACTGCTGA CCAAGGTCTA CCAGCTCCCC GCCGATAAGC TCTGGGTCAC GGTCTACGCC
GAGGACGACG AGGCTTACGA CATCTGGGCC AAGGAAGTGG GCGTGCCGGC CGACCGCATC
GTGCGCATCG GCGACAACAA GGGCGCGCGC TACGCGTCGG ACAACTTCTG GCAGATGGCC
GACACCGGCC CGTGCGGCCC GTGCTCGGAA ATCTTCTACG ACCACGGCCC GGATGTGTGG
GGCGGCCCCC CGGGATCGCC GGAAGAAGAC GGCGACCGCT ACATCGAGAT CTGGAACCTG
GTGTTCATGC AGTTCAACCG CGACGAGCAG GGCACCATGA CGCCGCTGCC CAAGCCGTGC
GTGGACACCG GCATGGGCCT GGAGCGTATT GCCGCCGTGC TGCAGCACGT GCACAGCAAC
TACGAGATCG ATCTGTTCCA GGCACTGATC AAGGGTGCCG GCCGTGAAAC GCATATCGCG
GACCTGAACC AGAATTCGCT GAAGGTCATC GCCGACCACA TCCGCGCCTG CTCGTTCCTG
ATCGTCGACG GCGTGATTCC GGGCAACGAG GGCCGTGGCT ATGTGCTGCG CCGTATCGTG
CGCCGCGCGA TTCGTCATGG CTACAAGCTC GGTCAGAAGA CGCCGTTCTT CCACAAGCTC
GTGGGCGACC TCGTCGCGCA GATGGGCGAA GCCTATCCGG AACTGGCCGA AGCCCAGTCG
CGCGTGGTGG AAGTGCTGAA GGCCGAGGAA GAGCGCTTCT TCGAAACCAT CGAAAACGGC
ATGTCGATCC TCGACGCCGC CGTGGCGGAC CTGAAGGCCA AGGGCGGCAA GGTGCTCGAC
GGCGAACTGG CGTTCAAGCT GCACGATACG TTCGGCTTCC CGCTCGACCT GACGCAGGAC
GTGGCGCGCG AGCAGGAGAT CACGGTGGAC GAAGCGGCGT TCGACGCCGC GATGACCCGC
CAGCGCGAAC AGGCCCGTGC GGCCGGCAAG TTCAAGATGG CCGCAGGCCT CGAATACTCG
GGCGAGAAGA CCGTGTTCCA CGGCTACGAC GCGCTCTCGA TGGATGGCGT GCGTGTGACC
GCGTTGTACG TTGATGGCGC ATCGGTCGAC ACGATGCAGC CGGGCCAGAG CGGTGTAGTT
GTGCTGGACA ACACGCCGTT CTATGCCGAG TCGGGCGGTC AGGTGGGCGA TCAGGGCACG
CTGGTGTCGG GCCCGGCCGT GTTCGCCGTG GCGGATACCA CCAAGATCCA GTCCGACGTG
TTCGGTCATC AGGGCACGCT GGCCAATGGC GCGCTCAAGG TGGGCGATAC CGTAGCGGCA
CAGGTCGACG CGGTCCGCCG CGCCCGCACC GTGCGCAACC ACTCGGCTAC CCACCTGATG
CACAAGGCGC TGCGCGAAGT GCTGGGCACC CATGTGCAGC AGAAGGGCTC GCTGGTCGAT
CCGGACAAGA CCCGCTTCGA CTTCTCGCAC AACGCGCCGC TGACCGACGC GCAGATCCGC
CAGATCGAAG AGATCGTCAA CGCCGAGATC CTGAGCAATG CGCCGACCGT GGCGCAGGTC
ATGCCGTTCG ACGACGCGGT CAAGAGCGGC GCGATGGCAC TGTTTGGCGA GAAGTACGCT
GACGATGTGC GTGTGCTGTC AATCGGTACC TCGAAGGAAC TGTGCGGCGG CACGCACGTG
ACCCGCACCG GCGATATCGG CCTGTTCAAG ATCGTCGTGG AAGCTGGCGT GGCCGCTGGT
ATCCGCCGCG TGGAGGCGAT CACCGGCGAC AACGCGCTGC ACTACCTGCA ATCGCTCGAC
GCCCGTCTCA ACGAAGCCGC CGCCGCGCTG CGCGCGCAGC CTTCGGAGCT GGTGCCGCGC
ATCGGCCAGG TGCAGGACCA GGTTCGCGCG CTCGAGAAGG AACTGGAAAA GCTCAAGAGC
AAGCTGGCTT CGTCGCAAGG CGATGAACTC GCCGCGCAGG CCGTGGACGT CAAGGGCCTG
AAGGTGCTGG CTGCCCAGCT CGACGGCGCC GACGTGAAGA CGCTGCGCGA AACGATGGAC
AAGCTCAAGG ACAAGCTGCA GAGCGCGGCC ATCGTGCTGG CGGCTGTGGC TGACGGCAAG
GTGAGCCTGA TCGCGGGTGT GACTGCCGAC GCCACGTCGA AGGTCAAGGC CGGCGAACTG
GTCAACTTCG TTGCCCAGCA AGTAGGCGGC AAGGGCGGTG GCCGTCCGGA CATGGCCCAG
GCAGGCGGCA CCGATCCGGC AAATCTGCCG AAGGCGCTGG CTGGCGTGAC GGAGTGGGTG
TCGGCGAAGG TCTGA
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| Protein sequence | MPRRRLRPHN MKVSDIRSKF LQFFESKGHT VVRSSSLVPA NDPTLLFTNS GMVQFKDVFL
GTDKRPYVRA TSSQRSVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKREAIQYAW
ELLTKVYQLP ADKLWVTVYA EDDEAYDIWA KEVGVPADRI VRIGDNKGAR YASDNFWQMA
DTGPCGPCSE IFYDHGPDVW GGPPGSPEED GDRYIEIWNL VFMQFNRDEQ GTMTPLPKPC
VDTGMGLERI AAVLQHVHSN YEIDLFQALI KGAGRETHIA DLNQNSLKVI ADHIRACSFL
IVDGVIPGNE GRGYVLRRIV RRAIRHGYKL GQKTPFFHKL VGDLVAQMGE AYPELAEAQS
RVVEVLKAEE ERFFETIENG MSILDAAVAD LKAKGGKVLD GELAFKLHDT FGFPLDLTQD
VAREQEITVD EAAFDAAMTR QREQARAAGK FKMAAGLEYS GEKTVFHGYD ALSMDGVRVT
ALYVDGASVD TMQPGQSGVV VLDNTPFYAE SGGQVGDQGT LVSGPAVFAV ADTTKIQSDV
FGHQGTLANG ALKVGDTVAA QVDAVRRART VRNHSATHLM HKALREVLGT HVQQKGSLVD
PDKTRFDFSH NAPLTDAQIR QIEEIVNAEI LSNAPTVAQV MPFDDAVKSG AMALFGEKYA
DDVRVLSIGT SKELCGGTHV TRTGDIGLFK IVVEAGVAAG IRRVEAITGD NALHYLQSLD
ARLNEAAAAL RAQPSELVPR IGQVQDQVRA LEKELEKLKS KLASSQGDEL AAQAVDVKGL
KVLAAQLDGA DVKTLRETMD KLKDKLQSAA IVLAAVADGK VSLIAGVTAD ATSKVKAGEL
VNFVAQQVGG KGGGRPDMAQ AGGTDPANLP KALAGVTEWV SAKV
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