| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0830 |
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| Symbol | |
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| ID | 4037621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 904524 |
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| End bp | 905744 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637976206 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_582985 |
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| Protein GI | 94309775 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0441069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0516739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGCTT TAAGCCATCT TCGCGTCCTC GACCTGACCC GCGTGCTCGC GGGCCCGTGG
TGCGCCCAGA ATCTTGCCGA TTTCGGCGCC GACGTGATCA AGATCGAGCG CCCAGGCGCC
GGTGACGACA CGCGCATCTG GGGCCCGCCC TGGCTCAAGA CCCCCGAGGG TGAAGACACG
GCCGAGGCCG CCTACTACCT GGCGGCCAAC CGCAACAAGC GTTCGGTGAC GTGCGACATC
AGCACGCCGG AGGGGCAGCA ACTCGTGCGC GACCTGGCCG CGCAGAGCGA TGTGGTGCTC
GAAAACTACA AGGTCGGACA ACTCAAGAAG TATGGCCTCG ATTATGAATC GCTCAAAGCG
ATCAAGCCGG ACCTGATCTA CTGCTCGGTC ACCGGCTTCG GACAGACCGG CCCCTACGCC
CAGCGTCCGG GCTACGATTT CATCATCCAG GGCATGGGTG GCTTCATGAG CATCACGGGC
GAGCGCGACG ACCTGCCCGG AGGCGGCCCG CAGAAAGCCG GCGTGGCGAT CTCCGACCTC
ATGACGGGCC AGTACGCCAC CATCGCCGTG CTGGCCGCAC TGGCCCACCG CGACCGTACC
GGCGAAGGCC AGTACATCGA CATGGCGCTG CTGGACGTGC AGGTGTCGAT GCTGGCGAAC
ATGAACACCA ACTACCTGGC CAGCGGCGTC CCGCCGAAGC GCTGGGGCAA CGCGCACCCG
AACATCGTCC CTTACCAGAC GTTCCAGGCC GCCGATGGAT GGCTCATCGT CGCGGTGGGC
AACGACGGCC AGTTCCGCAA GTTCGTCACC GCCGGCGGCC GCCCCGAGTT GGCCGACGAC
CCGCGCTTCG CCACCAATCC GCAGCGCGTG GCGCACCGAG ACGTGCTGGT ACCGATCCTG
GCCGAGATGG TGGCGCCGCG CACGCGTGAA CAGTGGATTC TGGACCTCGA GCGTGCCAGC
GTGCCATGCG GGCCGATCAA CACGCTCGAC GAGGTCTTCG AGAACGAGCA GGTGGTGGCG
CGTGGCCTGC GCGTGGACCT GCCCCACCCC TCGGCCGGCA CGGTCAAGCT GGTGGGCAGC
CCGATGAAGA TGAGCGCCAC GCCGACCGAG GCGCTGCGCC ATCCGCCGTT GCTTGGGGAG
CACACGGATG TGGTGCTTGG CGAGACACTC GGCTACAGTG CCGAACACAT CGCCGCCCTG
CGCAACAAGG GCGTGGTCTG A
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| Protein sequence | MGALSHLRVL DLTRVLAGPW CAQNLADFGA DVIKIERPGA GDDTRIWGPP WLKTPEGEDT
AEAAYYLAAN RNKRSVTCDI STPEGQQLVR DLAAQSDVVL ENYKVGQLKK YGLDYESLKA
IKPDLIYCSV TGFGQTGPYA QRPGYDFIIQ GMGGFMSITG ERDDLPGGGP QKAGVAISDL
MTGQYATIAV LAALAHRDRT GEGQYIDMAL LDVQVSMLAN MNTNYLASGV PPKRWGNAHP
NIVPYQTFQA ADGWLIVAVG NDGQFRKFVT AGGRPELADD PRFATNPQRV AHRDVLVPIL
AEMVAPRTRE QWILDLERAS VPCGPINTLD EVFENEQVVA RGLRVDLPHP SAGTVKLVGS
PMKMSATPTE ALRHPPLLGE HTDVVLGETL GYSAEHIAAL RNKGVV
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