Gene Rmet_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0825 
Symbol 
ID4037616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp898721 
End bp900223 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content63% 
IMG OID637976201 
Producthypothetical protein 
Protein accessionYP_582980 
Protein GI94309770 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0559407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGT TAGACAACCT CGGACTGGGC TTTGCAACCG CCCTGTCACT GCAAAACCTC 
GCCTACGCAT TCCTGGGCTG CGTGCTCGGG ACGCTGATTG GTGTGCTGCC GGGCCTCGGG
CCTCTGGCCA CCATCGCCAT GCTGCTGCCG GTGACGTACA CGCTGCCGCC GGTGGCTGCG
CTGATCATGC TGGCCGGTAT CTACTACGGC GCGCAGTACG GTGGGTCGAC CACCGCCATT
CTGGTGAACC TGCCTGGTGA ATCATCATCA GTGGTGACCA CGATCGACGG CTACCAGATG
GCGCGTCGTG GCCGTGCCGG TGTGGCACTG GCTACCGCCG GTCTCGGCTC GTTCTTCGCT
GGCTGCGTGG CTACCCTGAT CCTGGCCGCG TTTGCCGCGC CGCTGTCGGA ACTGGCGTTC
AAGTTCGGTC CCGCCGAGTA CTTCTCGCTG ATGGTGCTGG GTCTGATCGG CGCCGTGGTG
CTGGCTTCGG GCTCGCTGTC GAAGGCCGTG GCGATGATCG TGCTGGGCCT GTTGCTGGGT
CTGGTCGGTA CCGACGTGAA CTCGGGCGCT GCGCGCTTCT CGTTCGACGT ACCTGAACTG
ACCGACGGCC TGAACTTCGT GTCGGTGGCG ATGGGTGTAT TCGGCTTCGC GGAAATCATC
GCGAACCTGG AGCAAAAGGA AGCCCGCGAA ACCTTCACGG ACAGCGTGAC GAACCTGTTC
CCGACCAAGG AAGACTTCAA GCGCATGATT CCGGCGGTGC TGCGTGGCAC GGCGCTGGGT
TCGGCGCTGG GTATCCTGCC GGGTGGTGGT GCAGCGCTGG CTTCGTTCGC CGCGTACTCG
CTGGAAAAGA AGACGTCGAA GTTCTCGCAC GAGTTCGGCA AGGGTGCGAT CGAAGGCGTG
GCGGGTCCGG AATCGGCCAA CAACGCCGCT GCCCAGACCT CGTTCATCCC GCTGCTGACG
CTGGGCATTC CGCCCAACGC CGTGATGGCG CTGATGGTCG GTGCGATGAC GATCCACAAC
ATCCAGCCTG GTCCGCAGGT GATGAGCAGC AACCCTGCGC TGTTCTGGGG CCTGATCGCC
TCGATGTGGA TCGGCAACTT CATGCTGATC ATCCTGAACC TGCCGATGAT CGGCGTGTGG
GTGAAGCTGC TCAAGGTGCC GTACCGCTTC CTGTTCCCGG CGATCCTGAC GTTCTGCTGC
ATCGGCGTGT ACTCGGTCCA GAACACCACG TTCGACGTGT TCCAGACCGC GGCCTTCGGC
GTGATCGGCT ACCTGTTCAT CAAGCTGAAG TGCGAACCCG CACCGCTGCT GCTGGGCTTC
GTGCTCGGAC CGATGATGGA AGAGAACTTC CGCCGCTCGC TGCTGCTGTC GCGTGGTGAC
TTCAGCGTGT TCGTGACGCG CCCGCTGTCG CTGGGTCTGC TGATCGGCGC GGCAGTGCTG
GTGCTGATCG TGGCCATGCC GTCGATCAAG GCCAAGCGCG AAGAAGCATT CCAGGAAGAG
TAA
 
Protein sequence
MELLDNLGLG FATALSLQNL AYAFLGCVLG TLIGVLPGLG PLATIAMLLP VTYTLPPVAA 
LIMLAGIYYG AQYGGSTTAI LVNLPGESSS VVTTIDGYQM ARRGRAGVAL ATAGLGSFFA
GCVATLILAA FAAPLSELAF KFGPAEYFSL MVLGLIGAVV LASGSLSKAV AMIVLGLLLG
LVGTDVNSGA ARFSFDVPEL TDGLNFVSVA MGVFGFAEII ANLEQKEARE TFTDSVTNLF
PTKEDFKRMI PAVLRGTALG SALGILPGGG AALASFAAYS LEKKTSKFSH EFGKGAIEGV
AGPESANNAA AQTSFIPLLT LGIPPNAVMA LMVGAMTIHN IQPGPQVMSS NPALFWGLIA
SMWIGNFMLI ILNLPMIGVW VKLLKVPYRF LFPAILTFCC IGVYSVQNTT FDVFQTAAFG
VIGYLFIKLK CEPAPLLLGF VLGPMMEENF RRSLLLSRGD FSVFVTRPLS LGLLIGAAVL
VLIVAMPSIK AKREEAFQEE