| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0786 |
|---|
| Symbol | |
|---|
| ID | 4037577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 862397 |
|---|
| End bp | 863932 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637976162 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_582941 |
|---|
| Protein GI | 94309731 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0655509 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0950055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC CCATCCTCAT CGCCAAGAAT GCCGACCAAG AACTCGTGCT GTTGCCCGAA
ATGGGCAACC GCCACGGCCT GATCACCGGG GCGACCGGCA CGGGCAAGAC CGTCACGCTG
CAGACGCTGG CCCAGGGCTT CTCGCGGCTG GGCGTGCCGG TGTTCATGGC CGACGTAAAA
GGTGACTTGA CCGGCATTTC CCAGGCCGGC CAGCCCACGG ACAAGCTCAA GGCCCGCCTG
GCCGAGCATG GCCTGCCCGA GCCGGTCTGG GGCGCATGCC CGACCACGCT CTGGGACGTC
TTCGGCGAAA AAGGCCACCC GGTGCGCGCG ACGGTTTCCC ATATGGGGCC GCTGCTGCTG
TCGCGGATGC TCGAACTCAA CGATACCCAG GAAGGCGTGC TGAACCTGGT ATTCCGCATC
GCGGACGCTA ACGGCCTGCT GCTGCTCGAT TCCAAGGATC TGCGGGCGAT GCTCCAGTAC
GTGGGCGACA ACGCGGGCCA GTTCACGACC GAGTACGGCA ATATTTCGGC GGCGTCGATC
GGCGCGATCC AACGTGGTCT GGTGGCGCTC GAATCGCAGG GAGCGGACAA GTTTTTCGGC
GAGCCGATGC TCAATCTCGA GGACTTCATC CAGACCGAGA AGGGGCAGGG CGTGGTCAAC
ATCCTGGCCG CCGACAAGTT GATGAACGCG CCGCGGCTCT ACGCGACCTT CCTGCTGTGG
ATGCTGTCCG AATTGTTCGA GAAGCTACCC GAGGCCGGCG ATCTGGAAAA GCCCAAGCTG
GTGTTCTTCT TCGACGAGGC GCATCTGCTG TTCAACGATG CGCCCAAGGC GCTGCTCGAC
AAGATCGAGC AGGTCGTGCG GCTGGTGCGC TCGAAGGGCG TGGGTGTGTA TTTCGTGACG
CAGAATCCGG TCGATATCCC GGACACTGTG CTCGGTCAGC TTGGCAACCG CGTGCAGCAC
GCGCTGCGCG CATTCACGCC GCGTGACCAG AAGGCGGTCA AGGTGGCGGC CACGACGATG
CGCGCGAACC CGAAGCTCAA TCTGGAGCAG GTTATCGGCG AACTCGGCGT GGGGGAGGCG
CTGGTGTCGT GCCTCGACGC CAAGGGCACG CCCTGCGTCA CCGAGCGTGC CTGGGTGCTT
GCGCCCGGCA GCCGTATCGG CCCGATCACG GACGACGAGC GTCGGGCGTT GATCGCGGGG
TCACTGGTGG CGGGTACCTA TGAGAAAACG ATTGACAGGG AATCGGCGTA CGAGAAGTTG
CGCGGCAACG CGGCGGCGTC GGGAACGGGA ACGCCGGGGC CGGCCAGTGG CGGCGCGGCA
GGCGGGACAA GTGGTAGCGC GGAGCAGGGC GGCTGGCTCG ATCAGGCTGG CGAGATCTTC
GGCACGCTGA CGAAAGGTAC CGGCAAGACC GGGCGCGGCG ATTCGATCCT TGAGTCGATG
GCCAAGTCGG CGGCGCGGAC GGTGGGTTCC CAGGTGGGAC GGGAACTGAT TCGCGGCGTG
CTGGGCAGTC TGCTCGGCGG CGGCAAGCGC AAGTAG
|
|---|
| Protein sequence | MADPILIAKN ADQELVLLPE MGNRHGLITG ATGTGKTVTL QTLAQGFSRL GVPVFMADVK
GDLTGISQAG QPTDKLKARL AEHGLPEPVW GACPTTLWDV FGEKGHPVRA TVSHMGPLLL
SRMLELNDTQ EGVLNLVFRI ADANGLLLLD SKDLRAMLQY VGDNAGQFTT EYGNISAASI
GAIQRGLVAL ESQGADKFFG EPMLNLEDFI QTEKGQGVVN ILAADKLMNA PRLYATFLLW
MLSELFEKLP EAGDLEKPKL VFFFDEAHLL FNDAPKALLD KIEQVVRLVR SKGVGVYFVT
QNPVDIPDTV LGQLGNRVQH ALRAFTPRDQ KAVKVAATTM RANPKLNLEQ VIGELGVGEA
LVSCLDAKGT PCVTERAWVL APGSRIGPIT DDERRALIAG SLVAGTYEKT IDRESAYEKL
RGNAAASGTG TPGPASGGAA GGTSGSAEQG GWLDQAGEIF GTLTKGTGKT GRGDSILESM
AKSAARTVGS QVGRELIRGV LGSLLGGGKR K
|
|---|
| |