| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0754 |
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| Symbol | dnaE |
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| ID | 4037545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 829627 |
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| End bp | 833157 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976130 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_582909 |
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| Protein GI | 94309699 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.291929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGAGC CGGTACAATG GCGCCCTATG TCCGCACCCC GCTTCGTACA CCTCCGCCTG
CACTCCGAGT ATTCGATCGT GGACGGCATC GTCCGCCTCG ACGACGCCGT CAAGGCCGCC
GCCCGCGATG GGATGGGCGC GCTTGCACTG ACCGACCTCG CCAACGCCTT CGGCCTGATC
CGCTTCTACA AGGAGGCCCG TGGTGGGGGC GTCAAGCCGG TAGTGGGCGC TGACGTCTGG
CTGACCAATG CCGAAGATCG CGACAAGCCC GCGCGCATGT TGCTGCTCGT GCAGGATCGC
ATCGGCTATC TGAACCTGTG CACGCTGCTG TCGCGTGCAT GGCTTGGCAA CCAGCATCGT
GGCCGTGCCG AGTTCGAGCC CGGCTGGCTC GGGGAGCCGG GTGAGGAGGG CTTGCCGCTG
GCCACCGGCT TGATCGCGCT GTCAGGCGCG ATGGGTGGTG ATGTCGGCCA GGCGTTGGCC
AATGGGAATG TCGAGGCGGC ACGCCGTGCT GCCGAGCATT GGGCCCGGGT GTTCCCGCAA
CGCTATTACA TCGAACTGCA ACGTGCCGGT CAGCCTGGCA CCGACGCCTA CGTGCCGCAG
GCTGTGCAAC TGGCCGCGTC GATGCAGCTT CCGGTGGTCG CCACGCATCC GGTGCAATTC
ATGACGCCGG ACGATTTCAC GGCGCACGAG GCGCGCGTCT GTATCGCGGA GGGCGAACTG
CTCGCCAATC CGCGCCGCAC GCGCAAGTTC ACCACCGACC AGTACTTCAA GACCCAGGAC
GAGATGACCG CGCTGTTCGC GGATATCCCG TCGGCGCTGC AGAACTCCGT CGAGATCGCC
AAGCGCTGCA ACCTGACGCT GGAGCTGGGC AAGCCACGCC TGCCGCTGTT CCCGACGCCT
GATGGCATGT CGCTCGACGA CTACCTTGTG TTCATGGCCA AGGAAGGTCT CGAGAAGCGG
ATGCTGGTGC TGTTCCCGGA CGAAGCCGAG CGCGAGAGCA AGCGTGCCGA GTACTACGCG
CGTCTGGAGT TTGAAACCGG CACCATCATC AAGATGGGGT TCCCGGGCTA CTTCCTGATC
GTGGCGGACT TTATCAACTG GGCCAAGAAC AATGGCGTGC CGGTGGGGCC GGGCCGGGGT
TCCGGCGCGG GTTCGCTGGT GGCCTACGCA CTTGGCATTA CCGATCTCGA TCCGCTCAAG
TACGCGTTGC TGTTCGAGCG ATTCCTGAAT CCGGAGCGGG TCTCGATGCC CGACTTCGAC
ATCGACTTCT GCCAGCACGG CCGCGATCGT GTGATCACGT ACGTGAAGGA GAAATACGGC
AAGGACGCCG TGTCGCAGAT CGCCACGTTC GGCACTATGG CCGCCAAGGC GGCCGTGCGC
GATGTGGGCC GGGTGCTGGA TCTCGGTTAC GGCTTTGTCG ATGGCGTGGC CAAGCTGATT
CCGTTCAAGC CCGGCAAGCT GGTCACGCTG GAGGAAGCGA AGAAGGAAGA ACCGGCGCTG
GCCGAACGCG AGCGCACGGA AGAGGAAGTA CGCCAGTTGC TGGAACTGGC GCAGCGCGTG
GAAGGCATGA CGCGTAACGT CGGCATGCAC GCTGGTGGCG TGCTGATCGC CCCCGGCCGC
CTGACCGATT TCTGCCCGCT CTACACGCAG GGCACGGACG GCATGAGCGG CGTGGTCAGC
CAGTACGACA AGGACGACGT GGAAGCGGCC GGACTGGTCA AGTTCGACTT CTTGGGCCTG
ACCACGCTGA CGATCCTCGA CTGGGCCGAG CGGTACATCC GCCGGCTCGA CCCGAGCAAG
GCCGACTGGA ACTGCAGCCA GATTCCGCTC GACGACAGTC CCGCATTCGA CATCCTCAAG
AGCGCCAACA CGGTGGCGGT GTTCCAGCTG GAAAGCCGCG GCATGCAGGG GATGCTCAAG
GACGCGAAGC CTGACCGCTT CGAGGACATC ATCGCGCTCG TGGCGCTGTA TCGTCCCGGC
CCGATGGACC TGATACCGAG CTTCTGTGCC CGAAAGCACG GCCGCGAGAA GGTCGAGTAT
CCCGATCCGC GCGTCGAACC CGTGCTCAAG GAGACCTACG GCATCATGGT CTACCAGGAG
CAGGTGATGC AGATGGCGCA GATCATCGGC GGCTACTCGC TGGGTGGCGC CGACTTGCTG
CGCCGTGCCA TGGGCAAGAA GAAGCCCGAG GAAATGGCCA AGCACCGTGA CATGTTCCGC
GAGGGCGCTG ACAAGAACGG GCTGACCGCC CAGCAGGCCG ACGACATCTT CGACCTGATG
GAGAAGTTCG CGGGCTACGG CTTCAACAAG TCGCACGCGG CTGCGTACGC GCTGCTAGCC
TACTACACGG CCTGGCTCAA GGCGCATCAT CCGGCCGAAT TCATGGCAGC CAACATGTCG
CTGGCCATGG ACGACACCGA TAAGGTCAAG ATCCTCTACG AGGACTGCCG CCTGAACAAG
ATCGAAGTGC TGCCGCCGGA CGTCAACGCC AGCGAGTACC GTTTCGCGCC GACCGATGCG
AAGACCATCC GCTACGGCCT GGGTGGCATC AAGGGTTCGG GCCAGGGGGC GATCGAGGAC
ATCCTGCGTG CGCGGGAAGA GCGGCCATTC GACGACCTGT TTGATTTCTG CGAGCGCGTG
GACCGCCGCC AGGTCAATCG CCGCACGATC GAGGCGCTGA TTCGCGCCGG CGCGTTCGAC
AGTCTCAACG ACAATCGTGC CCAGTTGCTG GCCTCGGTAT CGATCGCGAT GGAGGCGGCC
GACCAGAAGG CCGAGTCGGC CAACCAGGTG TCGCTGTTCG ACCTGATGGA TGACGCCGGC
GCGTCGCATC GCCCCGAACT GGTGGATGAG CCGCGCTGGA CGCCCAAGCG CACGCTGCAG
GAAGAGAAGC AGGCGCTCGG CTACTACTTC TCGGGTCACC TGTTCGATGC GTCGCGCGAC
GAGGTGCGCC GGTTCGTCAA GGGCACGCTT GCCGCGCTCG AAAAGGAAGT GCAGGGCAAT
GGCGGTGGCT ACGGCCGCGA CGTGCGTGGC AAGGTGATTG CCGGTGTGAT CACCGGCATC
CGTACCCAGA TGACCCAGCG CGGCAAGCTG ATCATCGTGC TGCTTGACGA TGGCACCGCG
CAGATCGAAA TGACGGTGTT CAACGAGTTG TACGACGCCA ATCGTCACAT GTTCCGCGAG
GACGAACTGC TGATCGCGCA GGGCAATGCG CGCCACGACA CCTTCACGGG CGGCGTGCGC
TTTACGGCGG ATTCGGTGCA GGACCTGGTT GCCGCGCGCG CCCGCTACGC CGATGCCGTC
TGCCTCGGCT TCAATGGCAA CGCCTCGACG GAGCGCCTGC GCGAGCTGCT GACGCCGTAC
CTGGCCCACG TGTCGCAGAC CCCCGGCGTG CCGGTTCGCA TCAGCTATGT CAACAAGACC
GCGCAGTGCG AGGCGATGCT GGGTGACCAA TGGCAGATCA CGCCTTCGGA GGAAGCGTTG
ACGAGCCTGC GTACCGCCCT GGGCGATACC GTGCGCGTGT TGTATGGCTG A
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| Protein sequence | MGEPVQWRPM SAPRFVHLRL HSEYSIVDGI VRLDDAVKAA ARDGMGALAL TDLANAFGLI
RFYKEARGGG VKPVVGADVW LTNAEDRDKP ARMLLLVQDR IGYLNLCTLL SRAWLGNQHR
GRAEFEPGWL GEPGEEGLPL ATGLIALSGA MGGDVGQALA NGNVEAARRA AEHWARVFPQ
RYYIELQRAG QPGTDAYVPQ AVQLAASMQL PVVATHPVQF MTPDDFTAHE ARVCIAEGEL
LANPRRTRKF TTDQYFKTQD EMTALFADIP SALQNSVEIA KRCNLTLELG KPRLPLFPTP
DGMSLDDYLV FMAKEGLEKR MLVLFPDEAE RESKRAEYYA RLEFETGTII KMGFPGYFLI
VADFINWAKN NGVPVGPGRG SGAGSLVAYA LGITDLDPLK YALLFERFLN PERVSMPDFD
IDFCQHGRDR VITYVKEKYG KDAVSQIATF GTMAAKAAVR DVGRVLDLGY GFVDGVAKLI
PFKPGKLVTL EEAKKEEPAL AERERTEEEV RQLLELAQRV EGMTRNVGMH AGGVLIAPGR
LTDFCPLYTQ GTDGMSGVVS QYDKDDVEAA GLVKFDFLGL TTLTILDWAE RYIRRLDPSK
ADWNCSQIPL DDSPAFDILK SANTVAVFQL ESRGMQGMLK DAKPDRFEDI IALVALYRPG
PMDLIPSFCA RKHGREKVEY PDPRVEPVLK ETYGIMVYQE QVMQMAQIIG GYSLGGADLL
RRAMGKKKPE EMAKHRDMFR EGADKNGLTA QQADDIFDLM EKFAGYGFNK SHAAAYALLA
YYTAWLKAHH PAEFMAANMS LAMDDTDKVK ILYEDCRLNK IEVLPPDVNA SEYRFAPTDA
KTIRYGLGGI KGSGQGAIED ILRAREERPF DDLFDFCERV DRRQVNRRTI EALIRAGAFD
SLNDNRAQLL ASVSIAMEAA DQKAESANQV SLFDLMDDAG ASHRPELVDE PRWTPKRTLQ
EEKQALGYYF SGHLFDASRD EVRRFVKGTL AALEKEVQGN GGGYGRDVRG KVIAGVITGI
RTQMTQRGKL IIVLLDDGTA QIEMTVFNEL YDANRHMFRE DELLIAQGNA RHDTFTGGVR
FTADSVQDLV AARARYADAV CLGFNGNAST ERLRELLTPY LAHVSQTPGV PVRISYVNKT
AQCEAMLGDQ WQITPSEEAL TSLRTALGDT VRVLYG
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