| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0749 |
|---|
| Symbol | rimM |
|---|
| ID | 4037540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 825838 |
|---|
| End bp | 826500 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637976125 |
|---|
| Product | 16S rRNA-processing protein RimM |
|---|
| Protein accession | YP_582904 |
|---|
| Protein GI | 94309694 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
|---|
| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGGCA ATGCCTCCGG CCGCAAGCCG TTGAATCTGG CCGCTACGCA AGGCGGTGCC
TCCGGCCGGC AGAAAAAACT GCCCGCCGCG CTGTTGTTCA CGGACACCCT GCCCGACGAT
CTGGTCGAGG TTGGCTACGT GGGCGCGGCA TATGGTATCC GGGGCTGGAT CAAAGTCCAG
CCACATGCGG ACGACGCCTC CGCATTGCTC CACGCCCGCC GTTGGTGGCT GCTTCGCGCG
CCGCCGGCCG GCGTGGTGTC GGCGCCGGCG CAGTCGGCCG AGGCTGTCAG CATCAAGATC
TCCCAGTCGC GTGAACACAG CGGTACCGTG GTTGCGCAGC CGGCCGGCGT TTCGGACCGC
AGTGTGGCCG AAATGCTCAA GGGGCGTCGT GTCTGGGTCC GGCGCGCGGA TTTTCCCGCG
GCGGAAGAGG GTGAGTTTTA CTGGGTCGAC CTGATCGGTT GTGCCGTGGT CAACGAGCAG
GGCGAAGCGC TCGGCGAGGT GACCGGCCTG ATCGACAATG GCGCCCATCA GATCCTTCAG
GTGGCCTACG AGCTGCCGGA CGGTAAGGCC GCTGAGCGGC TGATCCCGTT TGTCGACGCG
TTCCTGCGGA CGGTGGATAC ACCGGCCAGG CGGATCGTGG TGGACTGGGG GCTCGACTAC
TGA
|
|---|
| Protein sequence | MTGNASGRKP LNLAATQGGA SGRQKKLPAA LLFTDTLPDD LVEVGYVGAA YGIRGWIKVQ
PHADDASALL HARRWWLLRA PPAGVVSAPA QSAEAVSIKI SQSREHSGTV VAQPAGVSDR
SVAEMLKGRR VWVRRADFPA AEEGEFYWVD LIGCAVVNEQ GEALGEVTGL IDNGAHQILQ
VAYELPDGKA AERLIPFVDA FLRTVDTPAR RIVVDWGLDY
|
|---|
| |